Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_0546 |
Symbol | |
ID | 4437067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | - |
Start bp | 493707 |
End bp | 494576 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639676260 |
Product | transposase |
Protein accession | YP_820017 |
Protein GI | 116627398 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAAACCT TCCAAGCGAT TAAAGAATAT GCGGATGAGT ATGAAGAGGT TTCTATCAGC CACTTGTGCC ATATTCTAAA GGTATCTCGC TCAGGCTATT ACAAGTGGTT ACAACATCAA GAAACAACTT CTGAACAGGA AAATTTAGGC TTGATGGATA TCATCAAGAA ACTTCATAGC CAGCATAATG GTATTCTTGG TTATCGTCGT ATGACGCTAT TTGTCAATCG CAAGCTTGAA ACAAACTACA ACAAGAAGCG GATTCGACGC TTGATGCACA TTCTAGGTCT ACGTTCCATT ATCAGAAGAG CCAAGGGCTA TTGTACTAAA ACTAGCTTTG TCAATGTAGA GGACAACATT CTCAATCGTA ATTTTACAGC CACTGCTCCA AATCAGAAAT GGTGTACAGA TGTGACTTTC TTGAAGTACG GTTTCAGCTG TAAAGCCTAT TTGAGTGCTA TTAAGGATCT TTACGACGGC TCAATTGTCG CCTATGTAGT TGGTCAATTT AATGATAACG AATTGGTATT GGAAACACTT CGTAAAGCAC AAAAAGCTAA TCCTAATGCG ACACCATTAA TTCACAGCGA CCGAGGTTCG CAGTATACTT CGAAAGATTA TTACCGTTTA ACTACCCAGT ATCAGATGAC CCGCTCCATG TCTCGTGTTG GTAAGTGTAT TGACAATGCA CCAATTGAGA GTTTCTTTGG GCACTTTAAG ACGGAGTGCT ATGATTTGAA GAAGTATAAG ACTTTTGAGG AGCTAGTTTC AGATATTGAT GCCTACATCT ATTTTTACAA TCATCAACGT TTTCAAGAGC GCAATAACGG CCTTGCCCCT CTTGAAATGA GGAACAAGGC CGTCGCCTAA
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Protein sequence | METFQAIKEY ADEYEEVSIS HLCHILKVSR SGYYKWLQHQ ETTSEQENLG LMDIIKKLHS QHNGILGYRR MTLFVNRKLE TNYNKKRIRR LMHILGLRSI IRRAKGYCTK TSFVNVEDNI LNRNFTATAP NQKWCTDVTF LKYGFSCKAY LSAIKDLYDG SIVAYVVGQF NDNELVLETL RKAQKANPNA TPLIHSDRGS QYTSKDYYRL TTQYQMTRSM SRVGKCIDNA PIESFFGHFK TECYDLKKYK TFEELVSDID AYIYFYNHQR FQERNNGLAP LEMRNKAVA
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