Gene STER_0533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_0533 
Symbol 
ID4436793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand+ 
Start bp479163 
End bp479819 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content39% 
IMG OID639676250 
Productpeptidoglycan hydrolase 
Protein accessionYP_820007 
Protein GI116627388 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1705] Muramidase (flagellum-specific) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.679599 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCGAAAG GAAAAAAGAA AACTAAGTCG AAAGCTAGAC CTAAGAAATC TAAAAAGAAA 
AAGAAGTCTG TCTTGCTTTT TCCTAAATTT TTCCAAAAGT GGAGTCTGAT TTTTATTGGC 
CTATTTTCTT TATTGGGCCT CTTAGCTAGT TTAAATTTTC CAAGATTGAC TATGGAAAAA 
AATATGACGC CTACGGATGA GACGACGGTT GCTTTTATTG CTGAGATTGG TGAGACGTCG 
CGCTATTTGG CAGCTAGAAA TGATCTTTAT GCATCTGTCA TGATAGCTCA GGCTATTCTA 
GAATCTGACT CTGGACAATC ACAATTAAGT CAAAAGCCAC TTTACAATTT CTTTGGAATT 
AAAGGAGAAT ACAATGGTCA AAGTGTAACC TTACCGACCT GGGAGGATGA TGGTAAGGGA 
AATCCCTACC ATATCGATGC TGCCTTTCGT TCCTATGGTT CTGTGGAAAA TTCTCTACAG 
GACTATGTGG AGTTTCTTGA GGGTAGCTAC TATGTCGGAG TACACCGCTC CAAAACGAGA 
AGTTACAAAG ATGCGACTGC AGCCCTAACA GGTGTTTATG CCACCGACAC GACCTATGGT 
GATAAGTTGA ACAGCATCAT TGAACAATAT CAGTTAACTA TTTATGACAC ATATTAG
 
Protein sequence
MPKGKKKTKS KARPKKSKKK KKSVLLFPKF FQKWSLIFIG LFSLLGLLAS LNFPRLTMEK 
NMTPTDETTV AFIAEIGETS RYLAARNDLY ASVMIAQAIL ESDSGQSQLS QKPLYNFFGI 
KGEYNGQSVT LPTWEDDGKG NPYHIDAAFR SYGSVENSLQ DYVEFLEGSY YVGVHRSKTR 
SYKDATAALT GVYATDTTYG DKLNSIIEQY QLTIYDTY