| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_0525 |
|---|
| Symbol | tpiA |
|---|
| ID | 4436785 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | + |
|---|
| Start bp | 472851 |
|---|
| End bp | 473609 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639676242 |
|---|
| Product | triosephosphate isomerase |
|---|
| Protein accession | YP_819999 |
|---|
| Protein GI | 116627380 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0149] Triosephosphate isomerase |
|---|
| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCACGTA AACCATTTAT CGCTGGTAAC TGGAAAATGA ACAAAAACCC AGAAGAAGCA
AAAGCATTTG TTGAAGCTGT AGCGTCAAAA TTGCCTTCAG CTGACCTTGT TGAAGCTGGT
ATTGCGGTTC CTGCAGTTGA TTTGACAACT GTTATTGCTG CTGCTAAAGG TTCAAACCTT
AAAGTTGCTG CACAAAACAC TTACTTTGAA AATTCAGGTG CTTTCACTGG TGAAACTAGC
CCACAAGTTT TGAAAGAAAT CGGTACTGAC TATGTTGTTA TCGGTCACTC AGAACGTCGT
GACTACTTCC ACGAAACCGA TGAAGACATC AACAAAAAAG CTAAAGCAAT CTTTGCTAAC
GGTATGATTC CAATCATCTG TTGTGGTGAA TCTCTTGAAA CTTACGAAGC TGGTAAAGCA
GCAGAATTCG TAGGTGCTCA AGTTTCAGCT GCTTTAGCTG GATTGACTCC TGAGCAAGTA
GCTTCATCAG TTATTGCGTA CGAACCAATC TGGGCTATCG GTACCGGTAA ATCAGCTTCA
CAAGACGATG CACAAAAAAT GTGTAAAGTT GTGCGTGATG TTGTGGCAGC TGACTTCGGT
CAAGAAGTCG CTGACAAAGT ACGTGTTCTA TACGGTGGTT CAGTTAAACC TGAAAACGTT
GCTGAATACA TGGCTTGTCC AGATGTTGAC GGAGCTCTTG TAGGTGGAGC ATCACTTGAA
CCTGAAAGTT TCTTGGCATT GCTTGACTTC GTTAAATAA
|
|---|
| Protein sequence | MSRKPFIAGN WKMNKNPEEA KAFVEAVASK LPSADLVEAG IAVPAVDLTT VIAAAKGSNL
KVAAQNTYFE NSGAFTGETS PQVLKEIGTD YVVIGHSERR DYFHETDEDI NKKAKAIFAN
GMIPIICCGE SLETYEAGKA AEFVGAQVSA ALAGLTPEQV ASSVIAYEPI WAIGTGKSAS
QDDAQKMCKV VRDVVAADFG QEVADKVRVL YGGSVKPENV AEYMACPDVD GALVGGASLE
PESFLALLDF VK
|
|---|
| |