Gene STER_0488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_0488 
Symbol 
ID4436806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand
Start bp435022 
End bp435981 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content39% 
IMG OID639676208 
Productcompetence protein, transcription factor 
Protein accessionYP_819965 
Protein GI116627346 
COG category[R] General function prediction only 
COG ID[COG4469] Competence protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAATCG CTAAAAATCA GAAAGGGCTC TTGGTTTCGG CTCTTGAAAA TGGGTTGAAT 
CGTGAGGAAA CTTATAGGTG CCCTGGCTGT CAAGGAATTG TATTGTTGAG ACAGGGAAAG
GTGATATGCC CGCATTTTGC CCATAAATCT TTGCAGGATT GTCAGTTTTT CTCAGAAAAT
GAATCGGCCC AACATTTATC CCTAAAAGCT ACTGTGTATC AATCCCTGGA CAATCATGGT
GAAAGAGTTT GTATTGAAAA GGTTCTGCCT GAGTTAGGTC AGATTGCGGA TTTATTCGTT
GGAGATTCCT TAGCCTTGGA AGTCCAGTGT TCTCGTTTAT CACAGAAACG TTTAAGAGAG
CGGACTTTAG CTTACCATCA AATAGGTTAC GAGGTGCGAT GGCTTTTGGG GCAAGAACTG
TGGTTGGGAC AGCGTTTAAC AGATCTACAG CGTGATTTTC TTTATTTTAC AACTAAGATA
GGTTTCCACC TCTGGGAACT TGATTGGGAG AGGGAAGAGA TTAGACTTAA GTATCTCATC
TATGAGGATA TTTTTGGGAG AGTTTATTAC TTAACTAAGA CCTGGTCTTT AATAGAAAAT
CTCATGACCA TATTACGTTT TCCTTATCAG GCCAGAAAGG TGGAGACTTA TCAAGTGACT
CAGCGAAAGA AAGTTTCACA TGTTATTCAA CGGGAATTAA TGGGGAAAAA TCCAAGATGG
ATGAGAAGGC AGGAGGAGGC TTATCTTAAA GGGATGAATT TGTTAAGTTT GTCCGATCAG
GATTTTTTTC CACAAGTGCG GTTTCCTGAG TCTAAGCATG GATTTGTCCA AATTAGATTA
TCTATTGATG GTTTTGAAAA GCTTTTCATG CAGTATTATC GAAAAAGGGA TTTTTCTTAC
AAGCAAACCC TGTGCCCTCC CAACTTTTAT GCTAAAATAG TAGATTATAG ACACAATTAA
 
Protein sequence
MLIAKNQKGL LVSALENGLN REETYRCPGC QGIVLLRQGK VICPHFAHKS LQDCQFFSEN 
ESAQHLSLKA TVYQSLDNHG ERVCIEKVLP ELGQIADLFV GDSLALEVQC SRLSQKRLRE
RTLAYHQIGY EVRWLLGQEL WLGQRLTDLQ RDFLYFTTKI GFHLWELDWE REEIRLKYLI
YEDIFGRVYY LTKTWSLIEN LMTILRFPYQ ARKVETYQVT QRKKVSHVIQ RELMGKNPRW
MRRQEEAYLK GMNLLSLSDQ DFFPQVRFPE SKHGFVQIRL SIDGFEKLFM QYYRKRDFSY
KQTLCPPNFY AKIVDYRHN