Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_0423 |
Symbol | |
ID | 4437354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | + |
Start bp | 368096 |
End bp | 369415 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639676150 |
Product | tRNA methyltransferase, TrmA family |
Protein accession | YP_819907 |
Protein GI | 116627288 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGATCA ATGGTGAGGG TATTGGTTTT TATAAAAAAA CGCTGGTTTT TGTTCCTGGA GCTTTGAAAG GAGAAGAGGT GTTTTGTCAG ATTGTTTCGG TTAAGAGAAA CTTTGTTCAG GCAAAACTAT TAAAAATTAA TAAAGCTTCC AAGTTTCGTG TTGATCCTGA ATGTGGTGTC TATGAAGAGT GTGGTGGTTG CCAGTTGATG CATCTTCGTT ATGATAAACA ATTAGAGTTT AAAACGGACC TGTTAGGACA AGCTTTGAAA AAGTTCAAAC CGGCTAATTT TGAGTCTTAT GAGATTCGTC CAACAATAGG AATGAAGCAA CCACAACATT ATCGTGCTAA ACTACAATTT CAAATACGTT CTTTTGGTGG CTCAGTTAAG GCTGGCTTAT TTGCGGAAGG AAGTCATCGA CTAATCAATA TTGATGATTG TTTGGTTCAA GATGAGTTAA CGCAAGCGAT TATGAATAAA GTGACAAATT TGCTAGATAA ATACAAGCTA CCGATTTATA ATGAGCGCAA AATTTCCGGG ATTCGCACAG TTATGATACG ACGTGCTTTA GGGTCTAATC AGGTCCAGCT AATTTTTGTA ACATCTAATC CTGTTTCTTT GACTAAGTTG GTGAAGGAGT TAACTTTAAG TTATCCTGAA ATTGTAACAG TTGCTGTCAA TTATAACTAT TCGAAATCCA GTGAGATTTA TGGCCAAGAG ACAGAAATTA TCTGGGGTCA AGATACAATC CAAGAAGAGG TTCTAGACTA TAACTTCGCA CTTTCTCCTC GTGCCTTCTA CCAGTTGAAT CCTAAGCAAA CTGAAGTGCT CTATGGTCAG GCAGTTGAAG CTTTGGAAGT GGATAAGTCT GAACACCTTA TTGATGCTTA TTGTGGTGTT GGTACTATTG GACTTGCATT TGCAAAAAAA GTGAGCACCA TTCGGGGGAT GGATATTATT CCGGAAGCTA TCGAAGATGC TAGAAAAAAT GCTGAGTCAC TTGGACTGGA TAATGCTCAC TATGAGGTAG GAAAAGCTGA AGATATTATT CCTCGCTGGT ATAAGGAAGG GTATCGAGCG GATGCTCTTA TTGTAGATCC ACCGAGAACG GGTTTGGATA GTAAGTTACT TAAAACTATA CTGGAATATA CTCCCAAAAA AATGGTATAT GTCTCATGTA ATGTATCTAC TTTGGCAAGA GATTTAGTTT CTTTAGCTAA GGTATATGAT GTGAACTATA TTCAGTCAGT AGATATGTTT CCTCACACTG CTCGGACAGA AGCAGTTGTA AAGCTGACTA AGAAATGTAA TAAAAACTAA
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Protein sequence | MGINGEGIGF YKKTLVFVPG ALKGEEVFCQ IVSVKRNFVQ AKLLKINKAS KFRVDPECGV YEECGGCQLM HLRYDKQLEF KTDLLGQALK KFKPANFESY EIRPTIGMKQ PQHYRAKLQF QIRSFGGSVK AGLFAEGSHR LINIDDCLVQ DELTQAIMNK VTNLLDKYKL PIYNERKISG IRTVMIRRAL GSNQVQLIFV TSNPVSLTKL VKELTLSYPE IVTVAVNYNY SKSSEIYGQE TEIIWGQDTI QEEVLDYNFA LSPRAFYQLN PKQTEVLYGQ AVEALEVDKS EHLIDAYCGV GTIGLAFAKK VSTIRGMDII PEAIEDARKN AESLGLDNAH YEVGKAEDII PRWYKEGYRA DALIVDPPRT GLDSKLLKTI LEYTPKKMVY VSCNVSTLAR DLVSLAKVYD VNYIQSVDMF PHTARTEAVV KLTKKCNKN
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