Gene STER_0407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_0407 
Symbol 
ID4436727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand+ 
Start bp357761 
End bp358423 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content32% 
IMG OID639676134 
Productlate competence protein 
Protein accessionYP_819901 
Protein GI116627282 
COG category[R] General function prediction only 
COG ID[COG1040] Predicted amidophosphoribosyltransferases 
TIGRFAM ID[TIGR00201] comF family protein 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.00143489 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTGTC TACTATGTAA TGAATGGATT GAACCAGTAG CTCAATTAAG TGATTTAATT 
ATGTTTAAAC AAAGAAGAGA GTATTCTTGT GAAGATTGTA AAGCTCAATT TAAAAAGCTT 
GGGAAGGCGA GATGTTCAAA TTGTTATAAA ATAATAGATG GAAATAGTTG CTTTGATTGC 
AAAATTTGGG CGAAAAAAGG CTATATTCCA AAACATTTTG CCATTTATCG TTATGAAGAA 
AACATGAAAG AGTATTTTAG TCGCTATAAA TTTATGGGAG ATTATTGTCT TAGAAAAATA 
TTTCAACAAG AAATTAAAGC CAATTTAAAG TCTTTTTTAA AGAAAGGTTA TATCTTAGTA 
CCTGTCCCCT TGTCGGAAGA ACGCCTGGAA GAGAGAGGAT TCAATCAAGT TAAAGGATTA 
CTAGAGGGAA TCCCCTATAA AAACATTTTT GAAAAAAGAG AGATCGAGAA GCAATCCTCG 
AGAACACGCG AAGAGCGGTT AAGTCAAGAT AATTCTTTCA GTTTGAAGAA AGGTATTGAG 
CTACCAAGTA AGATCATCAT AATCGATGAT ATTTACACAA CAGGATCTAC CCTGTATCAA 
ATGGTCAAAC TATTAGAGGA TTTAGATGTC AAAGAAGTTT TGACATTTTC CTTAGCTAGA 
TAA
 
Protein sequence
MKCLLCNEWI EPVAQLSDLI MFKQRREYSC EDCKAQFKKL GKARCSNCYK IIDGNSCFDC 
KIWAKKGYIP KHFAIYRYEE NMKEYFSRYK FMGDYCLRKI FQQEIKANLK SFLKKGYILV 
PVPLSEERLE ERGFNQVKGL LEGIPYKNIF EKREIEKQSS RTREERLSQD NSFSLKKGIE 
LPSKIIIIDD IYTTGSTLYQ MVKLLEDLDV KEVLTFSLAR