Gene STER_0394 details

Gene Information

• Locus tag: STER_0394
• Symbol: upp
• ID: 4436714
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptococcus thermophilus LMD-9
• Kingdom: Bacteria
• Replicon accession: NC_008532
• Strand: +
• Start bp: 346931
• End bp: 347560
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 639676122
• Product: uracil phosphoribosyltransferase
• Protein accession: YP_819889
• Protein GI: 116627270
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0035] Uracil phosphoribosyltransferase
• TIGRFAM ID: [TIGR01091] uracil phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTAAAT TTCAAGTTAT TTCACATCCA TTGATTCAAC ATAAACTGTC AATCTTACGT 
CGTGAGGATA CGTCTACCAA GGACTTCCGT GAGTTGGTTA ATGAAATCGC TATGCTTATG 
GGTTATGAAG TATCGCGTGA TCTTCCTCTT GAAGAGGTTG AAATTCAAAC ACCAATTATA 
AAAACAGTTC AAAAACAACT TTCTGGTAAA AAATTGGCAA TTGTTCCAAT CCTTCGTGCG 
GGTATTGGTA TGGTAGATGG TTTCCTTAGC CTCGTACCTG CAGCAAAAGT TGGTCATATT 
GGTATGTACC GTGATGAAGA AACACTTGAG CCAGTTGAGT ACTTGGTTAA ATTGCCAGAA 
GATATTGATC AACGTCAGAT TTTTGTAATG GACCCAATGC TTGCAACTGG TGGTTCAGCA 
ATTTTGGCGG TGGATTCACT TAAAAAACGT GGAGCAGCTA ATATCAAGTT TGTATGTTTA 
GTTGCCGCAC CAGAAGGTGT AAAAAAATTA CAAGATGCTC ACCCAGATAT TGATATATAC 
ACAGCATCTT TGGATGAGAG ACTTAATGAG AATGGTTATA TTGTTCCAGG TCTTGGAGAT 
GCAGGTGACC GTCTGTTTGG TACAAAATAA 

 

Protein sequence

MGKFQVISHP LIQHKLSILR REDTSTKDFR ELVNEIAMLM GYEVSRDLPL EEVEIQTPII 
KTVQKQLSGK KLAIVPILRA GIGMVDGFLS LVPAAKVGHI GMYRDEETLE PVEYLVKLPE 
DIDQRQIFVM DPMLATGGSA ILAVDSLKKR GAANIKFVCL VAAPEGVKKL QDAHPDIDIY 
TASLDERLNE NGYIVPGLGD AGDRLFGTK