Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_0343 |
Symbol | |
ID | 4438203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | + |
Start bp | 297629 |
End bp | 298321 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639676075 |
Product | ABC-type metal ion transport system, permease component |
Protein accession | YP_819842 |
Protein GI | 116627223 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2011] ABC-type metal ion transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000324678 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGATT GGATTCAACA AAACTTTCCA GATATTTATC GTATCGGTAT GCAGGGGGCT AACTCTTGGC CAGATGCCAT CTACGCGACA CTTTATATGA CTGTGATTTC CTTCATCATT GGTGGGCTTC TCGGTCTCAT TATGGGTCTC TTCTTAGTAT TGACAGGTCC TCGCGGTGTC ATTGAAAATA AATTTATTTT CCAAATCTTG GATAAAATTA CTTCAATCTT TCGTGCCATT CCTTTCATCA TCCTCTTGGC CATTTTGAAA GACTTCACTT ACTTTATCGT AGGGACTAAC CTTGGTAAGA CAGCGGCTTT GGTTCCATTA TCAGCTGCAA CCTTCCCATT CTTTGCACGT CAAGTACAGG TGGTACTGGC AGACTTAGAC CGTGGAGTGA TTGAAGCAGC ACAAGCTAGT GGTGCAAATC TTTGGGACAC GATTAAGGTT TATCTTGGCG AAGGACTCCC AGAATTGGTT CGTGTATCAA CAGTGACTTT GATTTCCCTT GTGGGTGAAA CTGCCATGGC TGGAGCTATC GGTTCAGGTG GTCTCGGATA CATCGCCATC TACTACGGAT ACAATCGTTC AAGTACATCA GTTACCATCT TAGCAACCTT CTTGATTTTG ATTTTGATTT TCCTTATTCA GTTTCTCGGT GATTTCTTGA CCCGTAAGTT GAGTCATAAA TAG
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Protein sequence | MSDWIQQNFP DIYRIGMQGA NSWPDAIYAT LYMTVISFII GGLLGLIMGL FLVLTGPRGV IENKFIFQIL DKITSIFRAI PFIILLAILK DFTYFIVGTN LGKTAALVPL SAATFPFFAR QVQVVLADLD RGVIEAAQAS GANLWDTIKV YLGEGLPELV RVSTVTLISL VGETAMAGAI GSGGLGYIAI YYGYNRSSTS VTILATFLIL ILIFLIQFLG DFLTRKLSHK
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