| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_0325 |
|---|
| Symbol | ureC |
|---|
| ID | 4436941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | + |
|---|
| Start bp | 278577 |
|---|
| End bp | 280295 |
|---|
| Gene Length | 1719 bp |
|---|
| Protein Length | 572 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639676058 |
|---|
| Product | urease subunit alpha |
|---|
| Protein accession | YP_819825 |
|---|
| Protein GI | 116627206 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0804] Urea amidohydrolase (urease) alpha subunit |
|---|
| TIGRFAM ID | [TIGR01792] urease, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.60778 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTTA AAATGGATCG TGAAGAGTAT GCTCAACACT ATGGACCAAC TGTAGGGGAT
AGCGTACGTC TTGGAGATAC CAATCTTTTT GCAACCATTG AAAAAGACTT TACTGTTTAT
GGACAGGAAT CTAAGTTCGG TGGCGGTAAA GTTTTGCGTG ATGGTATGGG TGTTAGTGCT
ACGGAAACAC GTGACAATCC ATCAGTTGTT GATACCATTA TTACAGGTGC AACCATCATT
GACTATACAG GTATTATTAA AGCAGATATC GGTATTCGTG ATGGTAAGAT TGTTGCTATT
GGTCGCGGTG GTAACCCAGA TACAATGGAC AATGTGGACT TTGTTGTGGG TGCTAGTACA
GAAGCCATTG CTGCAGAAGG TTTGATTGTG ACTGCTGGTG GTATTGACCT CCACGTACAT
TATATTTCTG CTGACCTTCC TGAATTTGGT ATGGATAATG GAATTACGAC CCTCTTTGGT
GGTGGTACTG GTCCCGCTGA CGGTAGTAAT GCAACAACAT GTACACCTGG TAAATTCCAT
ATTACTCGTA TGTTGCAAGC TGTTGATGAT ATGCCTGCTA ACTTTGGTTT CCTTGCCAAA
GGTGTTGGTT CTGAGACTGA AGTGGTTGAA GAGCAAATTA AAGCTGGTGC AGCAGGAATT
AAGACACACG AGGACTGGGG TGCGACTTAC GCAGGAATTG ATAATTCCCT TAAAGTTGCG
GATAAATACG ATGTTTCTTT TGCGGTCCAC ACCGACTCTT TGAATGAGGG TGGATTTATG
GAAAATACTT TGGAATCTTT CCAAGGTCGT ACCGTTCATA CCTTCCATAC CGAAGGTTCT
GGTGGTGGGC ACGCTCCAGA TATTATGGTT TTTGCAGGTA AGGAAAATAT TTTGCCATCA
TCAACTAACC CAACTAACCC ATATACTACA AATGCTATTG GTGAGTTGTT AGATATGGTT
ATGGTTTGTC ACCACTTGGA TCCAAAAATC CCAGAAGACG TATCTTTTGC CGAATCACGT
GTTCGTAAAC AAACTGTGGC TGCAGAAGAT GTTCTTCATG ATATGGGAGC CCTTAGTATC
ATGACTTCAG ACGCCATGGC AATGGGACGT GTCGGTGAAG TAGTAATGCG TTGTTGGCAA
CTAGCTGATA AGATGAAGGC TCAGCGTGGT CCACTTGAAG GAGATTCAGA GTTTAACGAT
AATAACCGTA TTAAACGTTA CGTGGCTAAA TATACAATTA ACCCTGCCAT CACCAATGGT
ATTGCAGACT ATATCGGTTC TGTAGAAGTT GGTAAATTTG CAGATTTGGT TATCTGGGAA
CCAGCACAAT TTGGTGCAAA ACCTAAGTTG GTGCTTAAGG GTGGTATGTT AACTTATGGT
GTTATGGGTG ACGCTGGCTC AAGTCTTCCA ACACCTCAAC CACGTATCAT GCGTAAATTA
TATGGTGCTT ATGGTCAAGC GGTTCATAAA ACAAATATTA CATTTGTCTC TCAATATGCT
TATGATCATG GTATCAAAGA AGAAATTGGT TTGAATAAGA TTGTTCTTCC TGTTAAGAAT
ACGCGTAACT TGACTAAGCG TGATATGAAG CTTAATGACT ACGCTCCAAA AACAATCCGT
ATCGATCCAC AGACCTTTGA TGTCTTTATT GATGATGAGT TGGTTACTTG TGAGCCAATC
CATACGACAT CATTGTCTCA ACGTTATTTC TTGTTCTAA
|
|---|
| Protein sequence | MSFKMDREEY AQHYGPTVGD SVRLGDTNLF ATIEKDFTVY GQESKFGGGK VLRDGMGVSA
TETRDNPSVV DTIITGATII DYTGIIKADI GIRDGKIVAI GRGGNPDTMD NVDFVVGAST
EAIAAEGLIV TAGGIDLHVH YISADLPEFG MDNGITTLFG GGTGPADGSN ATTCTPGKFH
ITRMLQAVDD MPANFGFLAK GVGSETEVVE EQIKAGAAGI KTHEDWGATY AGIDNSLKVA
DKYDVSFAVH TDSLNEGGFM ENTLESFQGR TVHTFHTEGS GGGHAPDIMV FAGKENILPS
STNPTNPYTT NAIGELLDMV MVCHHLDPKI PEDVSFAESR VRKQTVAAED VLHDMGALSI
MTSDAMAMGR VGEVVMRCWQ LADKMKAQRG PLEGDSEFND NNRIKRYVAK YTINPAITNG
IADYIGSVEV GKFADLVIWE PAQFGAKPKL VLKGGMLTYG VMGDAGSSLP TPQPRIMRKL
YGAYGQAVHK TNITFVSQYA YDHGIKEEIG LNKIVLPVKN TRNLTKRDMK LNDYAPKTIR
IDPQTFDVFI DDELVTCEPI HTTSLSQRYF LF
|
|---|
| |