Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_0295 |
Symbol | |
ID | 4438362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | + |
Start bp | 255949 |
End bp | 256443 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639676033 |
Product | HD superfamily hydrolase |
Protein accession | YP_819800 |
Protein GI | 116627181 |
COG category | [R] General function prediction only |
COG ID | [COG1418] Predicted HD superfamily hydrolase |
TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.232447 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCGAC CAGAAGATGA TAAAGAATTC ATGGAAGTTG TTGGACATTT GATTTCACAC CCACGTTTTC AAAAATTGGA TGGGATTGTC CAACATTATC ATTCGACACG TTTGGAACAC TCGGTTAATG TTAGTTACAC CAGCTACAAG ATTGCTAAAA AATTAGGTTG GGATGCTGAG AGCACTGCCC GAGGTGGTCT CTTGCATGAT TTTTTCTATT ATGATTGGCG AGTAACCAAA TTTAATAAGA GTCATGCTTG GGTGCACCCA CGGATTGCTG TTCGTAATGC TAGAAAGCTT GTTAATTTAA ACAAAAAAGA AGAGGATATC ATCCTCAAAC ATATGTGGGG AGCAACTATT GCACCGCCGA AGTATAAGGA ATCTTATATC GTTACCATGG TGGATAAGTA CTGGGCTGTT AAAGAAGCAG TGACACCTTT ACGAAATCGC ATTAAAAATA GTAAGTTTTT TCCGTCGCAA TACTCTACAA AGTAG
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Protein sequence | MNRPEDDKEF MEVVGHLISH PRFQKLDGIV QHYHSTRLEH SVNVSYTSYK IAKKLGWDAE STARGGLLHD FFYYDWRVTK FNKSHAWVHP RIAVRNARKL VNLNKKEEDI ILKHMWGATI APPKYKESYI VTMVDKYWAV KEAVTPLRNR IKNSKFFPSQ YSTK
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