Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_0291 |
Symbol | |
ID | 4438358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | + |
Start bp | 253181 |
End bp | 253669 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639676029 |
Product | transposase |
Protein accession | YP_819796 |
Protein GI | 116627177 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0515999 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAGT GTTATACGGA TGTGACAGAG TTTGCAATTC CAGCAAGCAG CCAAAAGCTC TATTTATCAC CAGTATTAGA TGGCTTCAAT AGTGAAATCG TCGCTTATAA TCTTTCTAGG TCGCCGAATT TAGTACAAGT GAAAGCTATG CTAGAACAAG CTTTTACAGA GGAGCATTAC GAAAATACAA TTCTCCATAG TGACCAGGGA TGGCAATGTC AACATGATTT CTATCATCAT TTTTTAGAGG GTAAAGGAAT CCAACCGTCC ATGTCACGTA AGGGAAATAG TCTAGACAAT GGTATGATGA AGTCCTTCTT TGGCATTCTT AAGCCTGAGA TGTTTTATGG TTACGAGAAG ACGTTTCACT CACTTGAGCA ATTGGAACAA GCTATTGTAG ACTATATTGA TTATTACAAT AACAAACTAA TCAAGGTAAA ACTAAAAGGA CTTATTTCTG TGCAATACAG AAATAAGTCC TTTGTGTAA
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Protein sequence | MEKCYTDVTE FAIPASSQKL YLSPVLDGFN SEIVAYNLSR SPNLVQVKAM LEQAFTEEHY ENTILHSDQG WQCQHDFYHH FLEGKGIQPS MSRKGNSLDN GMMKSFFGIL KPEMFYGYEK TFHSLEQLEQ AIVDYIDYYN NKLIKVKLKG LISVQYRNKS FV
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