Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_0260 |
Symbol | |
ID | 4438384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | + |
Start bp | 221679 |
End bp | 224006 |
Gene Length | 2328 bp |
Protein Length | 775 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639676002 |
Product | penicillin-binding protein 2A |
Protein accession | YP_819770 |
Protein GI | 116627151 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.882065 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACTTT TTGATAATCT AAAAAACAAA CTTTTTAAAG AAGAAACTAG CGGGAAGGGT AAGGAATCCC AGCCTGCTGG AAAATCGAAG GATTTACAAG ATAGGATAAA AGGTCTTTTT GCCAAGAAGC CTGATGAAGT TGAACAAGCC GTTGAAGAAC TTGACATGTC ACGAGAAAGC CAAGAGACTT CACGTTACCA ACGTTCTAAG CAAAAGAAAC CTATTGACAC GACCAAACCC TTAGGTAAGG TTCGGGCTTT CTTGAGCAAG TTCACTCTTT CGCCAAGAAA TCCTATTCGC CGTTTCTGGC GTCGCTATCA TATTGGTAAA ATTCTCTTTA TCTTGGTAGC CGTGTTGGTT CTGACAGTAG GCTCCTATCT CTTCTATATC GCTAAGACGA CCAATGTCTC AGATCTTCAG GATGCCTTGA AGGCTACTAC GGTTATCTAT GACAAAGAAG GCAATCAAGC TGGTTCACTG TCAGGGCAAA AAGGGACCTA TGTGGAGCTA GATGCTATTA GTGATAGCTT AGAAAATGCC GTCATTGCAA CGGAGGATCG TACCTTTTAC AAAAATAGTG GGATTAACGT CAAACGTTTC CTCCTAGCCA TTGTTTCTAT GGGCCGATTT GGTGGTGGTT CGACCATCAC ACAACAGTTG GCTAAAAATG CCTTTTTGAC TCAGGAACAG ACAGTAACTC GTAAGGCCAA GGAATTCTTT CTTTCTTTGG AACTAACCAA GAAATACAGC AAGCAAGAAA TCCTTACCAT GTATCTCAAT AATGCCTACT TCGGAAACGG TGTTTGGGGT GTTGAAGACG CCAGCCAAAA ATACTTTGGG ACAAGTGCTG CCAATCTAAC GGTGGATGAG GCAGCGACAC TTGCAGGTAT GCTTAAGGGA CCTGAAATTT ACAATCCGAT TGATAATATC CAAAATGCAA CCAACCGCCG AAACACTGTC CTTGCCAATA TGGTAGATGA TGAGAAGTTG AGTCAAGCTG ATGCTGATAG TGCAGCTGGA GTTGATATGG CTAGTCGCTT GGTTGATACT TATCAAGGGA CTGGTGATGA CTATAGGTAT CCGTCTTACT TTGATGCTGT CATTGAAGAA GCTACTAAGA CTTATGGCTT GAGTGAGGAT GAAATTGTTA AAAATGGCTA CAAAATCTAT ACAGAGATGG ATGCCAACTC ACAGGCTAAT ATGCAGCAGA CTTATGAAAA TAGTTATCTC TTTCCCACGT CAGAAAGTGA TGGTAGCACA GCCCAGTCAG CTAGTGTAGC ACTTGATCCA TCAACTGGAG CGGTTCGTGG TTTGGTAGGT CGTGTAGGTG GTACAGGTGA TACAACCTTC CGTAATTTCA ACTATGCAAC CCAAGGGAAG CGTAGTCCTG GTTCGACAAT CAAACCTTTG GTGGTTTATG CTCCAGCTCT GGCTTCAGGG TGGAGCATCA ATAAGGACCT ACCTAATACG CCAATTGATT ACAATGGCTA TACCCCAACC AACTATGGTG GTATTGAGAC TGATGATGTG CCCATGTATC AAGCTTTGGC CAACTCTTAC AATATTCCGG CAGTTTATCT CTTTAACCAA ATCGGTATAC AAAAAGGGAT TAGTTACGGT CAGAAATTTG GTCTTAACTT TGATAATGTT CCAGAAGAAT TAGGGATTGC ACTCGGTGGT GGTGTGACAG CTAGTCCTCT ACAAATGGCT CAGGCTTATG CGACCTTTGC CAATGGTGGG GAGATGAATA CAGCTTATTT TATCACTAAA ATTGAAAATG CTAGTGGTGA TATCATTGCT ACCCATAGTA AGAAGTCTAA ACGTATTATC AGCCAGTCTG TATCTAACCA GATGACTAGC ATGATGCTCG GTACCTTCTC AAATGGTTCC GCTGTTAATG CCAACTACAC GGGTTACACT ATGGCAGGTA AGACAGGTAC TGTTCAGGCC GAGTTTAACA AAGATTTGAC CAGTGACCAG TGGGTAATTG GCTATACTCC TGATGTGGTT ATAACGACTT GGATTGGTTT TGATAAGACT GACGAGAATC ACTACTTAAC AGGAGCAAGC TCAGGAACGG CTTCAACTAT TTTCAGCTAT ATCGCTGCAG ATGTTTTGCC AAATACACCA GGTAATGAGT TTACCGTTGA AAATGCCTAT GCGGCTGATG GTCAAACCTT AGATTATACA GCAAATCCAA ACGATTCACG TAATAGCAAT AATAAGTCAT GGACAGACAA GGCTTCAGAC GTTGTCAATG ATGTAAAAGA TCAAGCAAGC AGCCTATGGG ATAAGCTCTC AGACTCCTTC TCAGGTCTAT TCAGATAG
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Protein sequence | MTLFDNLKNK LFKEETSGKG KESQPAGKSK DLQDRIKGLF AKKPDEVEQA VEELDMSRES QETSRYQRSK QKKPIDTTKP LGKVRAFLSK FTLSPRNPIR RFWRRYHIGK ILFILVAVLV LTVGSYLFYI AKTTNVSDLQ DALKATTVIY DKEGNQAGSL SGQKGTYVEL DAISDSLENA VIATEDRTFY KNSGINVKRF LLAIVSMGRF GGGSTITQQL AKNAFLTQEQ TVTRKAKEFF LSLELTKKYS KQEILTMYLN NAYFGNGVWG VEDASQKYFG TSAANLTVDE AATLAGMLKG PEIYNPIDNI QNATNRRNTV LANMVDDEKL SQADADSAAG VDMASRLVDT YQGTGDDYRY PSYFDAVIEE ATKTYGLSED EIVKNGYKIY TEMDANSQAN MQQTYENSYL FPTSESDGST AQSASVALDP STGAVRGLVG RVGGTGDTTF RNFNYATQGK RSPGSTIKPL VVYAPALASG WSINKDLPNT PIDYNGYTPT NYGGIETDDV PMYQALANSY NIPAVYLFNQ IGIQKGISYG QKFGLNFDNV PEELGIALGG GVTASPLQMA QAYATFANGG EMNTAYFITK IENASGDIIA THSKKSKRII SQSVSNQMTS MMLGTFSNGS AVNANYTGYT MAGKTGTVQA EFNKDLTSDQ WVIGYTPDVV ITTWIGFDKT DENHYLTGAS SGTASTIFSY IAADVLPNTP GNEFTVENAY AADGQTLDYT ANPNDSRNSN NKSWTDKASD VVNDVKDQAS SLWDKLSDSF SGLFR
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