Gene STER_0246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_0246 
Symbol 
ID4436901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand
Start bp209010 
End bp210272 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content43% 
IMG OID639675990 
Productmembrane-associated Zn-dependent protease 1 
Protein accessionYP_819758 
Protein GI116627139 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0750] Predicted membrane-associated Zn-dependent proteases 1 
TIGRFAM ID[TIGR00054] RIP metalloprotease RseP 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCTA TTATTACTTT TTTACTGATT TTCTGTGTGA TTGTCGTCTT CCATGAGTTT 
GGCCATTTCT TCTTTGCCAA ACGATCAGGC ATTCTGGTGC GTGAATTTGC CATTGGGATG
GGTCCTAAAA TTTTTGCACA CACTGGTAAG GACGGTACCG TTTATACTAT TCGTATCCTT
CCTTTGGGTG GTTATGTGCG TATGGCTGGT TGGGGTGAAG ATACAACTGA GATTAAAACG
GGGAGTCCTG CTAGCCTAAC GCTTGGAAAA GATGGCAAAG TGAGACGTAT CAATCTTTCA
GATCGTCAGG TTGACCAGAC GGCTTTGCCT ATGAACGTTA CTGCCTATGA TTTGGAAGAT
AAGTTAACTA TTACAGGTCT TGTCCTAGGT GAGACCAAGA CCTATGAGGT TGACCATGAT
GCCACTATCG TTGAGGAAGA CGGTACGGAG CTTCGTATTG CTCCTAAGGA TGTCCAATAT
CAAAATGCTA GCATTTGGGG ACGTTTAATT ACCAATTTTG CTGGTCCTAT GAACAACTTT
ATTCTTGGGG TCTTGGTCTT TATTATCCTT GCCTTTGTTC AAGGTGGTGT TCAAGATACG
TCGACCAACC TTATCCAGGT GGCTAATGGT GGTGCTGCCC AGGTGTCAGG TTTGAAAACT
GGTGATGCCA TCGTGGCCAT TAACAAGGAC AAGGTTACTG ACTGGGACAG CTTGAAAGAA
GCATTGAGAG AGAATACCCA AAAATTCTCG AAAGGCGACA GCCTTTCTGT GACGGTTAAG
AGAAGTAATG GTCAGGAAGA AACTATTTCT GTTAAACCCC AAGAGAGCCA AGGGAGCTAC
TTTTTAGGTG TCTCTCCTGT CTTAAAGACA GGTCTTAAAG ATAAGATTTT TGGTGGTTTC
CAAATGGCTT GGGAAGGTGC GACGGCAATC CTCGCTACGC TCAAAGGGCT CATTACCAAC
TTTAGCTTGA ACAAGCTTGG TGGACCGGTT GCTATGTTCC AGATGTCTGC ACAAGCCTCA
GAAAGTGGGT TGATTTCCAT TCTTGACCTT ATGGGAATGC TCTCTATCAA CTTAGGAATT
TTCAATCTTA TTCCAATTCC AGCCCTTGAC GGTGGTAAAA TTGTTATGAA TATTATTGAA
GCTATTCGTC GTAAACCACT TAATCAAGAA ATTGAAAGCT ATATCACACT CGCAGGTGTT
GCGGTCATGG TTGTCCTTAT GATTGCAGTA ACTTGGAATG ATATTATGCG TGCTTTCTTT
TAA
 
Protein sequence
MKAIITFLLI FCVIVVFHEF GHFFFAKRSG ILVREFAIGM GPKIFAHTGK DGTVYTIRIL 
PLGGYVRMAG WGEDTTEIKT GSPASLTLGK DGKVRRINLS DRQVDQTALP MNVTAYDLED
KLTITGLVLG ETKTYEVDHD ATIVEEDGTE LRIAPKDVQY QNASIWGRLI TNFAGPMNNF
ILGVLVFIIL AFVQGGVQDT STNLIQVANG GAAQVSGLKT GDAIVAINKD KVTDWDSLKE
ALRENTQKFS KGDSLSVTVK RSNGQEETIS VKPQESQGSY FLGVSPVLKT GLKDKIFGGF
QMAWEGATAI LATLKGLITN FSLNKLGGPV AMFQMSAQAS ESGLISILDL MGMLSINLGI
FNLIPIPALD GGKIVMNIIE AIRRKPLNQE IESYITLAGV AVMVVLMIAV TWNDIMRAFF