Gene STER_0205 details

Gene Information

• Locus tag: STER_0205
• Symbol: def
• ID: 4438368
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptococcus thermophilus LMD-9
• Kingdom: Bacteria
• Replicon accession: NC_008532
• Strand: -
• Start bp: 173431
• End bp: 174045
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 639675954
• Product: peptide deformylase
• Protein accession: YP_819722
• Protein GI: 116627103
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0242] N-formylmethionyl-tRNA deformylase
• TIGRFAM ID: [TIGR00079] peptide deformylase

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.00141106
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATGCTC AAACCAAAAT TATTCGCGCC AGCCACATGA TTGATATGAA CGATATCATA 
CGCGAAGGCA ACCCAACCTT GCGTGCTGTC GCTGAAGACG TAACCCTACC ACTTTCAGAT 
GAAGATATTA TCCTTGGTGA AAAAATGATG CAGTTTCTTC GTAATTCACA GGACCCTGTT 
ATCGCTGAAA AAATGGGACT TCGAGGAGGT GTTGGTCTTG CAGCACCACA ATTAGATATT 
TCAAAACGCA TTATTGCTGT TCTCGTTCCA AATCCTGAAG ACGCTAAGGG GAATCCACCT 
AAAGAAGCTT ATAGCCTTCA AGAAATCATG TATAATCCTA AAGTAGTTGC CCATTCTGTT 
CAGGAGGCTG CTCTAGGTAA CGGTGAAGGA TGCCTTTCAG TCGATCGCGA CGTTCCTGGA 
TATGTCGTTC GCCATGCTCG TGTTACTATT GAATACTTCA ACAAAGAGGG TGAAAAGAAA 
CGTATTAAAC TCCGTGGTTA CGACTCAATC GTTGTTCAAC ATGAAATCGA CCATACTAAC 
GGTATCATGT TCTACGACCG TATCAATAAA GACAATCCAT TTACTATCAA GGATGGACTC 
TTGATTATCG AATAA 

 

Protein sequence

MDAQTKIIRA SHMIDMNDII REGNPTLRAV AEDVTLPLSD EDIILGEKMM QFLRNSQDPV 
IAEKMGLRGG VGLAAPQLDI SKRIIAVLVP NPEDAKGNPP KEAYSLQEIM YNPKVVAHSV 
QEAALGNGEG CLSVDRDVPG YVVRHARVTI EYFNKEGEKK RIKLRGYDSI VVQHEIDHTN 
GIMFYDRINK DNPFTIKDGL LIIE