| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_0200 |
|---|
| Symbol | |
|---|
| ID | 4438363 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | + |
|---|
| Start bp | 167067 |
|---|
| End bp | 169286 |
|---|
| Gene Length | 2220 bp |
|---|
| Protein Length | 739 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639675950 |
|---|
| Product | (p)ppGpp synthetase |
|---|
| Protein accession | YP_819718 |
|---|
| Protein GI | 116627099 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
|---|
| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.546884 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAAA ATAAAAATGT AACAGGAGAA GAAATTTTAG ACGTTTGCTC GGTATATATG
TCAGCAGATG ATTTGAAATT AGTCGAAAAG GCCTGGCATT ATGCGACAGA TGCTCATAGT
GAGCAATTTC GTCAGTCAGG AGAACCTTAT ATAATCCACC CTATTCAAGT GGCAGGTATT
TTGGCAGATC TCCATCTTGA TGCAGTAACA GTGGCCTGTG GTTTCTTGCA TGATGTCGTT
GAAGACACGG AAAAGACGCT AGATGATTTA GAAGCGGATT TTGGTACGGA TGTACGCAAT
ATCGTAGACG GTGTTACCAA GCTTGGTAAG GTTGAATATA AGTCTCACGA GGAGCAGTTG
GCTGAAAATC ACCGTAAGAT GCTTATGGCC ATGTCTAAGG ATATCCGAGT AATCTTGGTT
AAGTTGGCAG ACCGTTTGCA CAATATGCGT ACTCTCAAGC ATCTTCGTAA GGATAAGCAG
GAGCGCATTT CTCGTGAAAC GATGGAAATT TACGCTCCTT TGGCCCACCG TTTGGGTATC
AGCCGTATCA AATGGGAATT GGAAGACACG GCTTTCCGTT ACCTTAACGA GGTAGAATTT
TATAAGATTT CCCACATGAT GAAGGAAAAA CGCCGCGAGC GTGAGGCACT TGTGGACGAG
ATTGTCGATA AAATTAAGAC ATATACAGCT GAACAAGGGC TTGTCGGTGA TGTTTATGGC
CGTCCAAAAC ACATCTACTC TATTTTTCGT AAGATGCGTG ACAAGAAGAA ACGCTTTGAT
CAGATTTATG ATTTGATTGC TATTCGTTGT GTCATGGAGA CGCATAGTGA CGTTTATGCT
ATGTTGGGAT ACATCCACGA GCTCTGGCGT CCTATGCCTG GACGTTTCAA AGACTATATT
GCCAATCCTA AATCCAATGG TTATCAGTCT ATCCATACGA CGGTTTATGG TCCCAAAGGG
CCTATTGAAA TCCAAATCCG TACCAAGGAT ATGCACCAAG TTGCCGAATA CGGGGTTGCA
GCTCACTGGG CTTACAAGAA AGGTATCAAG GGCAAGGTCG ATTCGAAAGA GTCTGCTTTG
GGAATGAATT GGATTAAAGA TCTTGTGGAA CTCCAAGATG CCTCAAACGG GGATGCTAAG
GGATTTGTTG ACTCTGTAAA AGAGGATATC TTCTCAGAGC GAATTTATGT CTTTACACCA
AAAGGTGATG TTCAGGAATT GCCTAAAGAT TCAGGTCCTA TTGACTTTGC CTATGCCATC
CATACCCAAG TCGGCGAGAA AGCCACAGGT GCCAAGGTTA ATGGTCGTAT GGTGCCTCTG
ACTGCCAAAC TCAAGACGGG TGATGTGGTT GAGATTGTTA CCAATGCTAA TTCCTTTGGC
CCTAGTCGTG ACTGGATTAA GATGGTCAAA ACGACTAAGG CCAGAAATAA AATTCGTCAA
TTCTTTAAGA ATCAAGACAA GGAAGCTTCA ATCACCAAGG GTCGTGAGCT TTTGATAGCC
TATTTCCAAG AGCATGGCTA TATTGCCAAC AAGTACCTAG ACAAGAAACA TATAGAGGAG
ATCCTTCCTC GTATGAATGT GCGTAGTGAG GAAGCTCTCT ATGCTGCTGT TGGTTTTGGT
GAAATTAGTG CCGCTGCGGT TTTCAACCGT CTGACAGAAA AAGAACGCCG TGAGGAAGAG
CGTGCTAAGG CGAAAGCTGA AGCTGAAGAA CTAATGAATG GTGGCGAAGT CAAGACTGAG
AAGAAAGATG TTCTCAAGGT TAAAAGTGAA AATGGGGTTA TCATTCAAGG TGCCTCAGGT
CTCCTTATGC GTATCGCTAA GTGTTGTAAC CCAGTACCTG GAGATGAGAT TGATGGTTAT
ATCACTAAGG GACGTGGAAT AGCTATTCAT CGCTCAGATT GTAATAATAT CAAGAATCAA
GAAGGTTATG AGCAACGTTT AATTGAAGTT GAGTGGGATG AACGCAATAC CAATAAATCT
TACTTAGCTG AAATTGATAT CTATGGGCTT AATCGTTCGG GTCTTTTGAA CGATGTTCTT
CAAATCTTGT CAAATACAAC CAAGAGCATT GCTTCGGTTA ATGCACAACC AACTAAGGAT
ATGAAGTTTG CCAATATTCA CGTTAGCTTT GAAATTGCTA ATCTTATTGA ATTGACTGGC
CTTGTGGATA AGATTAAAAT TATTCCAGAT GTTTATAGTG TTAAACGTAC TAATGGTTAA
|
|---|
| Protein sequence | MAKNKNVTGE EILDVCSVYM SADDLKLVEK AWHYATDAHS EQFRQSGEPY IIHPIQVAGI
LADLHLDAVT VACGFLHDVV EDTEKTLDDL EADFGTDVRN IVDGVTKLGK VEYKSHEEQL
AENHRKMLMA MSKDIRVILV KLADRLHNMR TLKHLRKDKQ ERISRETMEI YAPLAHRLGI
SRIKWELEDT AFRYLNEVEF YKISHMMKEK RREREALVDE IVDKIKTYTA EQGLVGDVYG
RPKHIYSIFR KMRDKKKRFD QIYDLIAIRC VMETHSDVYA MLGYIHELWR PMPGRFKDYI
ANPKSNGYQS IHTTVYGPKG PIEIQIRTKD MHQVAEYGVA AHWAYKKGIK GKVDSKESAL
GMNWIKDLVE LQDASNGDAK GFVDSVKEDI FSERIYVFTP KGDVQELPKD SGPIDFAYAI
HTQVGEKATG AKVNGRMVPL TAKLKTGDVV EIVTNANSFG PSRDWIKMVK TTKARNKIRQ
FFKNQDKEAS ITKGRELLIA YFQEHGYIAN KYLDKKHIEE ILPRMNVRSE EALYAAVGFG
EISAAAVFNR LTEKERREEE RAKAKAEAEE LMNGGEVKTE KKDVLKVKSE NGVIIQGASG
LLMRIAKCCN PVPGDEIDGY ITKGRGIAIH RSDCNNIKNQ EGYEQRLIEV EWDERNTNKS
YLAEIDIYGL NRSGLLNDVL QILSNTTKSI ASVNAQPTKD MKFANIHVSF EIANLIELTG
LVDKIKIIPD VYSVKRTNG
|
|---|
| |