Gene STER_0197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_0197 
Symbol 
ID4438551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand
Start bp162948 
End bp163691 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content43% 
IMG OID639675947 
Product16S ribosomal RNA methyltransferase RsmE 
Protein accessionYP_819715 
Protein GI116627096 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000890176 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACAGT ATTTTATAAA GGGGCAGGTT GAAAATCCAG TGATCATCAA AGACAAGGAT 
ACTGTGAAGC ATATGTTTAA CGTTATGCGT TTAACAGAGG ATGATCAGGT TGTCTTGGTT
TTTGAAGACG GTGTCAAGCG CCTTGCTCGT GTGATTGATC GTGAGAATCA TGTCTTTGAA
GTGATTGAAG ACTTAAATGA GACTGTCGAG ATGCCTGTAT CTGTAACCAT TGCTTCTGGT
TTTCCCAAGG GAGACAAGCT GGAACTGGTG ACACAAAAGG TAACAGAGCT TGGAGCTCAG
GCTATTTGGG GCTTCCCTGC CGACTGGTCT GTAGTTAAAT GGGATGGTAA GAAGCTTGCC
AAGAAGGAAG ATAAACTTGC CAGAATTGCT CTAGGAGCTG CAGAACAATC CAAGCGTAAT
TGTGTTCCAG AAGTCAGATT GTTCGAGAAG AAGGGAGAAT TTCTATCAGA ATTAGCTCAT
TTTGATAAGA TTTTTATCGC CTATGAGGAA ACAGCTAAAG CGGGTGAGTT GGCTACTCTA
GCTCGTGAGT TGGCTAAGGT GGAAAATGGA CAGAAGCTCC TCTTTATCTT TGGACCAGAA
GGTGGTATTT CTCCGTCTGA GATTGATGCA TTTGAAGAAG CTGGTGGCGT TAAAATTGGC
CTTGGACCGC GTATTATGCG GACGGAAACA GCTCCCCTCT ATGCTTTGAG CAGTGTGAGT
TATGCCCTAG AATTGAATAA TTAA
 
Protein sequence
MQQYFIKGQV ENPVIIKDKD TVKHMFNVMR LTEDDQVVLV FEDGVKRLAR VIDRENHVFE 
VIEDLNETVE MPVSVTIASG FPKGDKLELV TQKVTELGAQ AIWGFPADWS VVKWDGKKLA
KKEDKLARIA LGAAEQSKRN CVPEVRLFEK KGEFLSELAH FDKIFIAYEE TAKAGELATL
ARELAKVENG QKLLFIFGPE GGISPSEIDA FEEAGGVKIG LGPRIMRTET APLYALSSVS
YALELNN