Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_0197 |
Symbol | |
ID | 4438551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | + |
Start bp | 162948 |
End bp | 163691 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639675947 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_819715 |
Protein GI | 116627096 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000890176 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACAGT ATTTTATAAA GGGGCAGGTT GAAAATCCAG TGATCATCAA AGACAAGGAT ACTGTGAAGC ATATGTTTAA CGTTATGCGT TTAACAGAGG ATGATCAGGT TGTCTTGGTT TTTGAAGACG GTGTCAAGCG CCTTGCTCGT GTGATTGATC GTGAGAATCA TGTCTTTGAA GTGATTGAAG ACTTAAATGA GACTGTCGAG ATGCCTGTAT CTGTAACCAT TGCTTCTGGT TTTCCCAAGG GAGACAAGCT GGAACTGGTG ACACAAAAGG TAACAGAGCT TGGAGCTCAG GCTATTTGGG GCTTCCCTGC CGACTGGTCT GTAGTTAAAT GGGATGGTAA GAAGCTTGCC AAGAAGGAAG ATAAACTTGC CAGAATTGCT CTAGGAGCTG CAGAACAATC CAAGCGTAAT TGTGTTCCAG AAGTCAGATT GTTCGAGAAG AAGGGAGAAT TTCTATCAGA ATTAGCTCAT TTTGATAAGA TTTTTATCGC CTATGAGGAA ACAGCTAAAG CGGGTGAGTT GGCTACTCTA GCTCGTGAGT TGGCTAAGGT GGAAAATGGA CAGAAGCTCC TCTTTATCTT TGGACCAGAA GGTGGTATTT CTCCGTCTGA GATTGATGCA TTTGAAGAAG CTGGTGGCGT TAAAATTGGC CTTGGACCGC GTATTATGCG GACGGAAACA GCTCCCCTCT ATGCTTTGAG CAGTGTGAGT TATGCCCTAG AATTGAATAA TTAA
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Protein sequence | MQQYFIKGQV ENPVIIKDKD TVKHMFNVMR LTEDDQVVLV FEDGVKRLAR VIDRENHVFE VIEDLNETVE MPVSVTIASG FPKGDKLELV TQKVTELGAQ AIWGFPADWS VVKWDGKKLA KKEDKLARIA LGAAEQSKRN CVPEVRLFEK KGEFLSELAH FDKIFIAYEE TAKAGELATL ARELAKVENG QKLLFIFGPE GGISPSEIDA FEEAGGVKIG LGPRIMRTET APLYALSSVS YALELNN
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