Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_0147 |
Symbol | |
ID | 4438299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | + |
Start bp | 121047 |
End bp | 121997 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639675901 |
Product | IS5 family transposase |
Protein accession | YP_819687 |
Protein GI | 116627068 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3039] Transposase and inactivated derivatives, IS5 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTAT TTGGAGATAG CGACTATCTT GAAAAATTAA GTTTAAAAGG AGACCCTCTT GAGCGGCTAG AAAAAGTGGT TGATTTCGAG TGTTTTCGCC CAACTCTTAA CCGGATTTTT AAGTATGATT TAAAAAACAA ATCTCATGGT GGTAGACCGC AATATGACCT TGTTTTAATG TTGAAAATTC TAATTTTACA ACGCTTATAC AATCTATCTG ATGATGCAAT GGAATATCAA ATGATTGACC GGATTTCGTT TAGAAGATTC CTTAAGATTG ATGACAAGGT ACCAGACGCA AAGACTATCT GGAACTTTAG AAATCAGCTA TCAAAATCTA ATAGAGGAAA CTGGCTTTTT TCTGCCTTTC AAGAAAAACT TGAATCACAA GGGATGATCG CTCATAAAGG ACAGATTGTT GATGCAACAT TCATAGAGGC GCCTAAACAA CGTAATCCAA AAGACGAAAA TGAATTGATT AAAGCAAATA GGGTACCAGT GAATTGGACG AAGAACAAAA GAGCACAGAA GGATACAGCT GCTCGCTGGA CAATTAAAGG TAATGAGAGA CACTATGGCT ACAAAAATCA TATTGCTATA GATACCAAAT CAAAATTCGT AAAGAATTAT CAAACAACGC CTGCAAATGT GCATGATTCT CAAGTAATAG GCGTTCTTGT TGATCCCGAT GAGATCACCT TAGCAGACTC AGCTTATCAA AATCAAGCAA CACCTAAAGG TACTGAACTT TTTACCTGTC TTAAAAACAC ACGTTCTAAA TCTCTTAAGG CAGACGATAA AATGTTTAAT AAAATCATTT CGAAAATACG TGTCCGTATT GAACATGTAT TTGGCTTTGT TGAAAATTCA ATGCATGGTT CTAGTTTACG TTCGGTTCTG TTGCGAAGTT TGAAAATCAA ACGCGCCCTC TCTGAACTCC AAATATCTTA G
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Protein sequence | MNLFGDSDYL EKLSLKGDPL ERLEKVVDFE CFRPTLNRIF KYDLKNKSHG GRPQYDLVLM LKILILQRLY NLSDDAMEYQ MIDRISFRRF LKIDDKVPDA KTIWNFRNQL SKSNRGNWLF SAFQEKLESQ GMIAHKGQIV DATFIEAPKQ RNPKDENELI KANRVPVNWT KNKRAQKDTA ARWTIKGNER HYGYKNHIAI DTKSKFVKNY QTTPANVHDS QVIGVLVDPD EITLADSAYQ NQATPKGTEL FTCLKNTRSK SLKADDKMFN KIISKIRVRI EHVFGFVENS MHGSSLRSVL LRSLKIKRAL SELQIS
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