Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_0139 |
Symbol | |
ID | 4436876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | - |
Start bp | 113500 |
End bp | 114180 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639675895 |
Product | transposase |
Protein accession | YP_819681 |
Protein GI | 116627062 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3316] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCATT TTAAAGGCAA ACAATTCAAA AAAGACGTCA TTATTGTCGC TGTTGGTTAC TACCTGCGTT ACAATCTAAG CTATCGTGAA GTTCAGGAAT TGTTATATGA TCGTGGAATA AATGTTTGTC ATACTACGAT TTATCGTTGG GTGCAAGAGT ACAGCAAAGT CCTCTATTAT CTTTGGAAGA AGAAAAATAG ACAATCCTTC TATTCATGGA AAATGGACGA AACCTATATC AAAATTAAGG GACGTTGGCA TTATCTTTAT CGTGCAATTG ATGCGGACGG CTTAACCTTA GATATCTGGT TACGAAAGAA ACGGGATACG CAAGCAGCCT ATGCTTTCTT AAAACGACTC CATAAACAGT TTGGTGAGCC GAAATCAATT GTGACCGATA AAGCACCTTC TCTTGGCTCC GCCTTTAGAA AGTTACAGAG TGTGGGTTTA TATCCTAAGA CAGAGCACCG AACTGTGAAG TATCTTAACC ATTTAATAGA ACAAGACCAT CGACCTATTA AACGACGGAA TAAATTTTAT CAAAGTCTCC GTACAGCCTC TTCCACGATT AAGGGCATGG AGACCCTTCG AGGAAGATAT AAAAAGAACC GAAGAAATGG AACGCTCTTC GGCTTTTCGG TGTCTACTGA AATCAAGGTA TTAATGGGAA TAACAGCCTA A
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Protein sequence | MNHFKGKQFK KDVIIVAVGY YLRYNLSYRE VQELLYDRGI NVCHTTIYRW VQEYSKVLYY LWKKKNRQSF YSWKMDETYI KIKGRWHYLY RAIDADGLTL DIWLRKKRDT QAAYAFLKRL HKQFGEPKSI VTDKAPSLGS AFRKLQSVGL YPKTEHRTVK YLNHLIEQDH RPIKRRNKFY QSLRTASSTI KGMETLRGRY KKNRRNGTLF GFSVSTEIKV LMGITA
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