| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_0138 |
|---|
| Symbol | |
|---|
| ID | 4436875 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | - |
|---|
| Start bp | 111876 |
|---|
| End bp | 113132 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639675894 |
|---|
| Product | transposase |
|---|
| Protein accession | YP_819680 |
|---|
| Protein GI | 116627061 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3464] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGACCTA TTAAGAATAC CACAGAATTA ATCGGAATTA AAGACCAAAA TATCAAGATT
TCACTTGTTT TTGAAACTGA AACTCATATC GAGATTCAAG CAAAACTTGA TTACCCTGCA
CCATCATGTC CTCATTGCCA TGGAAAGATG ATCAAATATG ACTTTCAAAA AAACTCTAAA
ATCCCTCTTC TCGAGCAAGC GGGAACGCCA ACTCTACTAC GTCTGAAAAA ACGTCGTTTC
CAGTGTAAAA GTTGTAGGAG AGTAACGGTG GCTGAGACAT CTATCGTTGA GAAAAACTGC
CAAATCTCCA ATCTAGTCCG ACAAAAAGTT ACACAACTCC TAACTGAGAA GGTGTCACTA
ACTGATATTG CGAGAAGACT TCGCGTGTCG ACGTCCACTG TCTATCGTAA GCTTGATCAG
TTTACTCTCA AGGAACATTA TGACAAACTC CCTGCTATTA TGTCCTGGGA TGAGTTTGGG
TTCAAGAAAG GGGAATTGGC TTTTGTGGCG CAGAATTATG AGACAAACGA ACTCATAACC
ATCCTTGATA ATCGCCGCCA AACTACTATA CGAAACTACT TTTTAAAGTA TCCATTGAAA
GTCCGACAAC AGGTACAGTT TATCACAATG GATATGTCTG GAGCCTATAT CCCACTAGCC
CGCAGACTCT TTCCAAACGC AAAAATCGTT CTTGATCGTT TCCACATTAT CCAGCACCTT
GGACGTGCCT TTTTAAAGAC TAGAATTGCA ATCATGAACC AATTCGATAA GAGGTCACTG
TCCTATCGAG CCTTGAAAAA TCATTGGCGA CTCTTCCAAA AGGACAGCCG TAAACTATCT
CTCAACTCTT TTTATTCAAA GACTTTCCGC CAAACTTTAG CACCACATGA AGTTGTTGAA
AAGACACTAG TCTTTTCAAA AGAGCTTACT GACTACTATA CACTTTATCA GCTTTTGCTT
TTTCACTTTC AGGAGAAGAG AGTAGATGAG TTCTTTGAAC TGATAGAGGA AAATAGAAGC
AAGGTCAATC ACTATTTTCA AACGGTCTTT AGAACTTTTC TTAGACACAA GCAATACATC
CAAAATGCAC TAGAAACAGA CTATTCAAAT GCAAAACTGG AAGCGACTAA TAAGTTGATC
AAAGACATCA AACGTTTGGG CTTCGGTTTT AGAAACTTTA TCAACTTTAA AAAGCGTGTC
TTCATCACTC TGAACATGCA TAAAAAGAGG ACCTATCCGG TCCTCTCTAG ATGTTAG
|
|---|
| Protein sequence | MRPIKNTTEL IGIKDQNIKI SLVFETETHI EIQAKLDYPA PSCPHCHGKM IKYDFQKNSK
IPLLEQAGTP TLLRLKKRRF QCKSCRRVTV AETSIVEKNC QISNLVRQKV TQLLTEKVSL
TDIARRLRVS TSTVYRKLDQ FTLKEHYDKL PAIMSWDEFG FKKGELAFVA QNYETNELIT
ILDNRRQTTI RNYFLKYPLK VRQQVQFITM DMSGAYIPLA RRLFPNAKIV LDRFHIIQHL
GRAFLKTRIA IMNQFDKRSL SYRALKNHWR LFQKDSRKLS LNSFYSKTFR QTLAPHEVVE
KTLVFSKELT DYYTLYQLLL FHFQEKRVDE FFELIEENRS KVNHYFQTVF RTFLRHKQYI
QNALETDYSN AKLEATNKLI KDIKRLGFGF RNFINFKKRV FITLNMHKKR TYPVLSRC
|
|---|
| |