Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_0049 |
Symbol | |
ID | 4436846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | + |
Start bp | 34376 |
End bp | 35083 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639675814 |
Product | phosphoribosylaminoimidazole-succinocarboxamide synthase |
Protein accession | YP_819617 |
Protein GI | 116626998 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase |
TIGRFAM ID | [TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.074199 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCAAACC AACTGATTTA TACTGGGAAA GCTAAAGATA TTTATAGTAC AGAAGACGAA AATGTGATTA AGTCGGTCTA TAAGGACCAG GCAACCATGC TTAATGGTGC TCGTAAGGAG ACCATTAAAG GGAAAGGCGT GCTTAATAAT CAGATTTCGT CTCTTATTTT TGAAAAATTG AACGCTTCGG GTGTGGCTAC TCATTTTATC GAACGTATCT CTGATACAGA ACAACTTAAC AAGAAGGTTA CAATCATTCC TTTGGAGGTT GTGCTTCGTA ACGTGACTGC GGGTTCTTTC TCAAAACGTT TCGGTGTGGA AGAAGGTCTG GACTTGAAAA CTCCAATTGT TGAATTTTAC TACAAAAACG ATGATTTGGA TGATCCATTT ATCAATGATG AGCATGTGAA GTTTTTGAAT ATTGCTAATG ATGAGCAAAT TGCTTATATC AAGGATGAAA CACGTCGTAT CAACGAATTG CTAAAAGATT GGTTTGAGCA AATTGGTCTT CGTTTGATTG ACTTCAAATT GGAATTTGGT TTTGATAAGG ATGGCAAGAT TATTTTGGCA GATGAATTTT CACCAGATAA CTGTCGTCTT TGGGATGCGG AAGGGCACCA TATGGATAAG GATGTTTTCC GTCGTGATCT CGGTAGCTTG ACAGATGTGT ATGAAGTTGT ATTGGAAAAA TTGCAAGGAT TGAAGTAA
|
Protein sequence | MSNQLIYTGK AKDIYSTEDE NVIKSVYKDQ ATMLNGARKE TIKGKGVLNN QISSLIFEKL NASGVATHFI ERISDTEQLN KKVTIIPLEV VLRNVTAGSF SKRFGVEEGL DLKTPIVEFY YKNDDLDDPF INDEHVKFLN IANDEQIAYI KDETRRINEL LKDWFEQIGL RLIDFKLEFG FDKDGKIILA DEFSPDNCRL WDAEGHHMDK DVFRRDLGSL TDVYEVVLEK LQGLK
|
| |