Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_0018 |
Symbol | |
ID | 4436890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | + |
Start bp | 18257 |
End bp | 18745 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639675784 |
Product | transposase |
Protein accession | YP_819608 |
Protein GI | 116626989 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.163137 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAGT GCTACACAGA TGTGACAGAG TTTGCCATTC CCAATAGCAC ACATAAATTG TATTTATCGC CTGTTTTAGA TGGTTTCAAC AGCGAAATTA TCGCTTATAA TCTCTCAACT TCACCAAACT TAGAACAAGT GAAATCTATG TTAGACCAGT CCTTCACAGA GGAGCATTAT GAAAATACAA TTCTCCATAG TGACCAAGGT TGGCAATACC AACATCAGTA TTATCATCAA TTTTTAGAGG ATAAAGGGAT CAAACAGTCC ATGTCACGTA AGGGAAATAG TCCAGACAAT GGTATGATGG AGTCTTTCTT TGGCATTCTT AAGTCTGAGA TGTTTTATGG TTACGAGAAG ATGTTTCACT CACTTGAGCA ATTGGAACAA GCTATTGTAG ACTATATTGA TTATTACAAT AACAAACTAA TCAAGGTAAA ATTAAAAGGA CTTAGTCCTG TGCAATACAG AACTAAATCC TTTGTGTAA
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Protein sequence | MEKCYTDVTE FAIPNSTHKL YLSPVLDGFN SEIIAYNLST SPNLEQVKSM LDQSFTEEHY ENTILHSDQG WQYQHQYYHQ FLEDKGIKQS MSRKGNSPDN GMMESFFGIL KSEMFYGYEK MFHSLEQLEQ AIVDYIDYYN NKLIKVKLKG LSPVQYRTKS FV
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