| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LEUM_2070 |
|---|
| Symbol | |
|---|
| ID | 4423783 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008531 |
|---|
| Strand | - |
|---|
| Start bp | 2033149 |
|---|
| End bp | 2033958 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 639675764 |
|---|
| Product | HAD superfamily hydrolase |
|---|
| Protein accession | YP_819512 |
|---|
| Protein GI | 116619141 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
|---|
| TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.208936 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGACCATTC AGCTGATAGC AACGGATTTA GACGGTACGT TTTTGACGGA CGATAAGAAG
TTTGATCAAG CATTGTTTCG TAATGTATTG CGTGAATTAA ATAAGAAGCA TATTCAATTT
ACGATAGCCA CAGGTGTTCA TCAAGAACGC ATTAATATCT TATTTAAAGA TTTTCTTAAT
GAGCCCTTGA ATTTTGTCAC CAATAACGGG GCTCGTGTGG TGAAAAGCGA TGGCACCGTG
TTGTTCTCGA AAGTTCTCCC CCCGGTAACT TTGCGTAAAA TTCAACAATT CTTGAATAAC
TATAGTATGC GTCCAGACCG TGGCTTGGTT TTTTCAACAG ATGAGACCGC TTATTTGCCT
TTGGATTTGG ATATGGCAAG TAACAAGCGT TATTTTAAAT ACTTTAAGTA CGTTAAAAGT
TTCGGTGACG TGCGTGAAAT TAACGAACCA ATCTACAAAG TCACTATGAG TTGGACAAAC
TTTGACGAAA AAAGGTTTTA CGATGATGCC CTTGCATTCT TTGGTGATGA TGTGCATATT
ACGGAAACAG GTACTGGGGC TATTGATATT GTTCCTGCCT ATGTCAATAA GGCCGAAGGA
TTAAAAATGT TAGCTGAAAG TTATGCGCTT GACTTGTCTC ATGCTGTTGC TTTTGGTGAT
GGTGGTAATG ATTTGGAAAT GTTAAACGCA GTTGGGCTGC CATATAAAAT GCCGGATGCT
GACATTATTG GTCAATTTAA TGTTGCATTG TCGGATAATA ATCATAGTGG TGTTTTAAAA
ACTATTCAAC AACTGATTAC TACAAAATAG
|
|---|
| Protein sequence | MTIQLIATDL DGTFLTDDKK FDQALFRNVL RELNKKHIQF TIATGVHQER INILFKDFLN
EPLNFVTNNG ARVVKSDGTV LFSKVLPPVT LRKIQQFLNN YSMRPDRGLV FSTDETAYLP
LDLDMASNKR YFKYFKYVKS FGDVREINEP IYKVTMSWTN FDEKRFYDDA LAFFGDDVHI
TETGTGAIDI VPAYVNKAEG LKMLAESYAL DLSHAVAFGD GGNDLEMLNA VGLPYKMPDA
DIIGQFNVAL SDNNHSGVLK TIQQLITTK
|
|---|
| |