| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LEUM_2014 |
|---|
| Symbol | |
|---|
| ID | 4423727 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008531 |
|---|
| Strand | - |
|---|
| Start bp | 1981191 |
|---|
| End bp | 1982423 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 639675708 |
|---|
| Product | major facilitator superfamily permease |
|---|
| Protein accession | YP_819457 |
|---|
| Protein GI | 116619086 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATTG ACTTAACTGA TAAGCCGCGG CCACTTGATG AAAAGTGGCT ACTTTTTGGT
ACTTTATTAT CCAACACTGG AAATTCAATG ATTTGGCCAG TCACGACACT TTATATGACC
GGTGTTTTGC ACCAAAGTTT TACGATGGCG GGACTAGTTT TAATGGTGGG ATCACTTATT
AGTATGGTTG GCTCATTTGT TGGTGGCAAA CTATTTGATA ATTGGCGGCC ATATGAAGCG
ATGGTAATTA CGAGTTTTAT CATCTTAATT GCTGTTTCCA GTCTAATTAT TTGGAATGGG
TGGCCCGTAT TTGCCTTTTT TATTTGGCTA GCTAATTTTG GTATGGGCGC GGAACAAACG
TTAGTTAACT CTTTTGCCAC AACAATTCCT GGTGAAAAAA CGCGCATCGT ATTCAATAAT
ATGTACATTG TGTTGAATAT TGGGGTGGTT TTGGGAACCT TAGCAGTAGG ATATTTATTT
GATTACGGTT TTAACCTGTT GATGATGATT TCGGCAGCAT TATATTTTAC ATTAATGTTA
ATTATTGCAA CCAAATTTAA TGTTCCGGTA GTTCGCACGA ATACTGAAGC AACAGGCGTT
ACGACGCCTG AAGGAACAGA AAAAGTAAGC AGTGTCGGTG CACCAAATCA ACGTTTTCGC
TTGACGCCAG TTTTAGTTGC CATTGGGGCA TTGCTGTTCA TTACGTATTT ATCCTACATG
CTGTGGGAAA CCGTGATGGC ACCGCACATG AAAAGTTTAG GTATGCCAAC GCGTAATTAT
GCAGACTTAT GGATGATTAA CGGCGTAACT ATTATTTTGC TTCAGAAGTT TGTTTCTAAT
TGGGCAAATC AGCGACCATA TCAAGTTTCA GTTATTTTAG GTAGTATTAT TTTTGCTTCT
AGCTTTTTCT TTTTAATATT TGTAAAAGAG TTTTGGCAAA TTGTGCTAGT GTTTGAATTA
CTAACGATTG GAGAAATGTT ACAAAGTCCG CAGGTTCCAG CATGGGTTGC GCAAATTACC
CCCAAAGAAG TAGCTGGACA GGCACAAGGT TTTGTTTCAA TGATGATCAG CTCAGGTCGA
GTCATTGGTC CCATTTATTC GGGTATGATG ATGGATCGAG GTTGGATGAA AATTCTTTTT
TTATCAGTAT TTATAATCAT GTTAATTATC ACAGCTTTGT TAGCGATCAC AATGGCGAAA
CGAACTAAAA AAACAGTGGA GAATAACAAA TAA
|
|---|
| Protein sequence | MQIDLTDKPR PLDEKWLLFG TLLSNTGNSM IWPVTTLYMT GVLHQSFTMA GLVLMVGSLI
SMVGSFVGGK LFDNWRPYEA MVITSFIILI AVSSLIIWNG WPVFAFFIWL ANFGMGAEQT
LVNSFATTIP GEKTRIVFNN MYIVLNIGVV LGTLAVGYLF DYGFNLLMMI SAALYFTLML
IIATKFNVPV VRTNTEATGV TTPEGTEKVS SVGAPNQRFR LTPVLVAIGA LLFITYLSYM
LWETVMAPHM KSLGMPTRNY ADLWMINGVT IILLQKFVSN WANQRPYQVS VILGSIIFAS
SFFFLIFVKE FWQIVLVFEL LTIGEMLQSP QVPAWVAQIT PKEVAGQAQG FVSMMISSGR
VIGPIYSGMM MDRGWMKILF LSVFIIMLII TALLAITMAK RTKKTVENNK
|
|---|
| |