Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LEUM_1992 |
Symbol | araD |
ID | 4423705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
Kingdom | Bacteria |
Replicon accession | NC_008531 |
Strand | - |
Start bp | 1960812 |
End bp | 1961540 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639675686 |
Product | L-ribulose-5-phosphate 4-epimerase |
Protein accession | YP_819435 |
Protein GI | 116619064 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
TIGRFAM ID | [TIGR00760] L-ribulose-5-phosphate 4-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00598433 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGAAA AGCTTAAAAA TGAAGTTTAT AAGGCTAATG TGGCGTTGCC TAAATTAGGA TTAGTAACAT TTACATGGGG AAATGTCTCA GGCATTGATC GTGAAAAAGG GCTATTTGTA ATAAAACCCT CTGGCATTGA GTATGACCAA TTAAAACCTT CCGATATGGT TGTGGTTAAT TTGGACGGAG AAGTTGTAGA AGGTAATCTC AATCCATCTA GTGACACGCC CACACACGCC TATCTCTACC AACACTTTTT AAATATAGGT GGTATCACGC ATACTCATTC ACCTTGGGGC GTTTCGTTTG CTGCGGCAAA AATGGACATC CCAGCTGTCA GCACAACGCA TGCTGATACA TTTTATGGGG ATATTCCTTG TGCACCGGCC CTAAGTGAAG AGGAAATTAA GACGGCCTAC GAACTAAATA CTGGGAAAGT TATTGTATCA GAGTTTGAGC ATCGTGGGCT TGATCCCGAC GCGACGCCTG CTGCCTTGGT CAGTCAACAT GGCCCATTTA CATGGGGCGC GACTCCAGAA AAATCCGTAT ACAATGCTAA AGTGCTCGAA GTATCAGCAG AAATTAGTTA CCATGCTTTG CAGTCAACAA GATCAGAAAT TCATGTTCCG CAATACTTGT TAGACAAACA TTATTATAGG AAGCACGGTG ATAATGCCTA TTATGGTCAG TCATCAACAC AGTCAAAAAA TCACATTACG CACGCCTAA
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Protein sequence | MLEKLKNEVY KANVALPKLG LVTFTWGNVS GIDREKGLFV IKPSGIEYDQ LKPSDMVVVN LDGEVVEGNL NPSSDTPTHA YLYQHFLNIG GITHTHSPWG VSFAAAKMDI PAVSTTHADT FYGDIPCAPA LSEEEIKTAY ELNTGKVIVS EFEHRGLDPD ATPAALVSQH GPFTWGATPE KSVYNAKVLE VSAEISYHAL QSTRSEIHVP QYLLDKHYYR KHGDNAYYGQ SSTQSKNHIT HA
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