| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LEUM_1976 |
|---|
| Symbol | |
|---|
| ID | 4423689 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008531 |
|---|
| Strand | - |
|---|
| Start bp | 1950157 |
|---|
| End bp | 1951965 |
|---|
| Gene Length | 1809 bp |
|---|
| Protein Length | 602 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 639675671 |
|---|
| Product | ATP-dependent DNA helicase RecQ |
|---|
| Protein accession | YP_819420 |
|---|
| Protein GI | 116619049 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0514] Superfamily II DNA helicase |
|---|
| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACTG CGAATCCACA AACAATTTTA AAAGAAAAAT TTGGGTACGA TAACTTTCGA
GCTGGTCAGC TAGATGTTAT TAATAAAGTA CTCGCACATA AACATGCTTT AGCTATTATG
CCAACTGGTG GTGGAAAATC AATTACCTAT CAGCTACCAG CAATGATGTT TGAAGGCATT
ACCTTAGTCA TTTCCCCATT AATTTCGTTA ATGAAAGACC AAGTTGACGG GTTGAACACC
ATGGGCATTC CTGCGACGTT CTTGAATTCG ACAGTTGATG GGCAAGAACA AGCACAACGC
ATGTCGGACC TAAGACATGG GCTTTACAAA ATGTTGTATG TTGCGCCTGA ACGACTAGAG
GTCCCTAGCT TTTTTAGTTT TGTTCAAAGT CTCAATATTG AGTTAATTGC TGTTGACGAA
GCCCACGTTT TATCACAATG GGGACATGAC TTTCGTCCGA GTTATCTGAA TATTCTACCT
TTGTTGGAAC AAATTTCTGG ACATCCAGCA GTTCTTGGTT TGACGGCCAC CGCAACAGAG
CGTGTTCGTG AAAACCTACA ACAATTGTTA CAAGTAGACG ATGATGATAC GGTCTTGACC
GGCTTTGCGC GAGATAATCT GGCTTTGAAT ATTGTACATA ATCAGGACAA ACGAAAGTAT
GTGGTTGAAT ATTTACAAAA AAATCGTGAA CAAACTGGTA TTATTTATGC AGCAACACGT
AAGCAAGTTG ATGAACTGAC CACTTATTTG AATAAAATAG GCATTAATGC AGGTCGTTAC
CATGCTGGAT TATCTGAAAA GGAACGTCAA AGACAGCAAG AAGCGTTTCT ATATGATGAA
AATCCAGTTA TTGTGGCTAC AAACGCTTTT GGGATGGGTA TTAATAAACC AAATGTGCGC
TACGTAATCC ATTACTCCGT CCCGGGAAAC ATTGAGGCAT ATTATCAGGA AATTGGCCGT
GCGGGTCGTG ATGGGTTACC CGCCGAAGCT ATATTATTAT ATGCACCACA GGATATGCAT
CTGCAAGAAT TCTTTGTTCA AAAGTCAGAA GGTTCAGAAG AACACAAGCA AAATGAATAT
GACAAAATTC GAGAAATGAA CGCTTTTGCT AATACGCAAA CTTGCTTAGC ACGGTATTTA
TTGCAATACT TCGGTGAAAC GGTGACAGAA GATTGTGGTC ATTGCTCGAA TTGTTTGGAT
ACGCGCGAGT GGGTTGATGT TACGGTAGAT GCGCAAAAAG TGCTGGCTAA TGTGATGCGT
ATGAATCAAC GCTTTGGTAA AACGATGGTC GCTAAGGTTT TAAAAGGATC AAATGATGCT
AGTGTGCGTA AGTATGAGTT TTTACATGAT TTACCAACGT TTGGTTTGAT GAAAGAGCGA
ACGCTAAAAG AGCTGACGCG CTTTATTGAC TACTTAACGG CTGAAGGATA TTTACGTTTC
GAGGGAGCAG AGTTTCCCGT GTTAAAAGTA ACATCGTTAG GTGCCGAAGT ATTAAAAGGT
GAAATTGAGA TTAAAAAACG TCTTGAGAAG GTACGTATTG TCAGTCAGAA AGTGACTACT
GATGATTTGA AACTTTCCGA CGAAGATAAT CGTCTGTTTG CAAAGTTAAA GGAAAAACGT
TTAGAATTAG CTCGGGCAGC TGGTTTGCCA CCTTTCTTAA TATTCTCAGA CAAAACGTTA
ATGAGTATGG CACAGGCGCG TCCGCAAACT GATACAGAGT TCTTAGCGAT CTCTGGTGTG
GGTGAAAAGA AGTTTGAAAT TTATCATAAT GATTTTGCAA AGGTTATTAA TGATTTTATT
GTAGTTTAA
|
|---|
| Protein sequence | MQTANPQTIL KEKFGYDNFR AGQLDVINKV LAHKHALAIM PTGGGKSITY QLPAMMFEGI
TLVISPLISL MKDQVDGLNT MGIPATFLNS TVDGQEQAQR MSDLRHGLYK MLYVAPERLE
VPSFFSFVQS LNIELIAVDE AHVLSQWGHD FRPSYLNILP LLEQISGHPA VLGLTATATE
RVRENLQQLL QVDDDDTVLT GFARDNLALN IVHNQDKRKY VVEYLQKNRE QTGIIYAATR
KQVDELTTYL NKIGINAGRY HAGLSEKERQ RQQEAFLYDE NPVIVATNAF GMGINKPNVR
YVIHYSVPGN IEAYYQEIGR AGRDGLPAEA ILLYAPQDMH LQEFFVQKSE GSEEHKQNEY
DKIREMNAFA NTQTCLARYL LQYFGETVTE DCGHCSNCLD TREWVDVTVD AQKVLANVMR
MNQRFGKTMV AKVLKGSNDA SVRKYEFLHD LPTFGLMKER TLKELTRFID YLTAEGYLRF
EGAEFPVLKV TSLGAEVLKG EIEIKKRLEK VRIVSQKVTT DDLKLSDEDN RLFAKLKEKR
LELARAAGLP PFLIFSDKTL MSMAQARPQT DTEFLAISGV GEKKFEIYHN DFAKVINDFI
VV
|
|---|
| |