Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LEUM_1962 |
Symbol | |
ID | 4423675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
Kingdom | Bacteria |
Replicon accession | NC_008531 |
Strand | - |
Start bp | 1936809 |
End bp | 1937537 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639675657 |
Product | GntR family transcriptional regulator |
Protein accession | YP_819406 |
Protein GI | 116619035 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00453299 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGAAT CTATCTATGT TACCGTACAA GCGGATCTAA AACAAAAAAT TTACCAGGGC GAATTTCCCA ACTTAAAATT ACCAGACGAA CGTTCTTTGG CTGAGCAATA TGGTGTGTCA CGCTCATCAA TCAAACGGGC ACTTAATGTA CTGGTGCAAC AAGGTGTTAT CTTTAAAAAG CGTGGCAGTG GCACCTTTGT TAATCCGCTT TATCTAAAAA ACCATGCAAT TTTCCAACAT GAAGGATCTA ACCTAGGTGT TTCTGATTCG TTTCGTGTTG ATGGAAAAGC GCCAAGCATT GAATTGTTGG ATTTTCAAGT CATTCCGGCT ACAACCGAAC AACAACAGGC CCTTTTTTTA AACGAGGGAG ATTTTGTCTA TGAAATTAAA CGGTTACGCC GACTAGAAGG GGTACCATTT ATGATTGAAC GAGGCTATGT ACCTATCAAT GTTTTGCCTG GGCTGAACAG AACGATAGTT TCCGGATCCG TTTATGAATA TATCGAAAAA ACAAAGCACC GCACGGTAAC TAAGTCGTTT ATGACCATTA TGGCTGAGCC TTCTAATGAT GAGGACCAAG AGTTGCTAGA ATTAACTGCT AACGAACCAG TCGGCATCAT GGAAGGCATT TTCTTCATGG ATGATGGAAC ACCGCTAGAA TTTTCGACAA TGCGTTTACA TTATAAGTAT CTTCGCTATA ATGCCTTCGT GAGTTTAGAC TCCGAATAA
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Protein sequence | MSESIYVTVQ ADLKQKIYQG EFPNLKLPDE RSLAEQYGVS RSSIKRALNV LVQQGVIFKK RGSGTFVNPL YLKNHAIFQH EGSNLGVSDS FRVDGKAPSI ELLDFQVIPA TTEQQQALFL NEGDFVYEIK RLRRLEGVPF MIERGYVPIN VLPGLNRTIV SGSVYEYIEK TKHRTVTKSF MTIMAEPSND EDQELLELTA NEPVGIMEGI FFMDDGTPLE FSTMRLHYKY LRYNAFVSLD SE
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