| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LEUM_1923 |
|---|
| Symbol | |
|---|
| ID | 4423654 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008531 |
|---|
| Strand | - |
|---|
| Start bp | 1892175 |
|---|
| End bp | 1893620 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 639675618 |
|---|
| Product | glycosyltransferase |
|---|
| Protein accession | YP_819369 |
|---|
| Protein GI | 116618998 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | [TIGR02918] accessory Sec system glycosylation protein GtfA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.586405 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTTT TTGTGAATAA GGCAATTGGA GAAAGTAATA GTGGCGTTGA ACACGCACAG
TTTTATCGTG CGCACTGTTT TCGTGAAAAA AAGATTGAAT TTAAATTTAT CTTCACTGAC
TTATTGCCAC AATTACACCA TCATATGCAA TTGTGGTCCC TACCAGAAAA TGAAGTTATC
GGATTATATG ATTTGTTGTT AAGTGATGAT CCAGATCGAT ACGCCAAAAC TGGTTTAACG
GAAATTAATG AATATTCCAC TAACTCTTTG TGGGACTTAA CGAACACGCA GCGCACTATC
GTGCATCAAA CGACGGGGCA ATATACTGAG ACCATTTTTC GTTCTAAAAG TTATTCTGAA
GCGAAAAAAT TATTCTTGAT TGACGATGAT CGTGTTATTT TAAAAAATGG TATCCATGAA
ATAATGTGGC ACTATCGAGA TAGTGGTTCA CGTGGAAAAA TTGCTACAAA TATTCATCTA
CGTAATTTTC GTGGTAAAAA TTATGTTTTT TCAACAAAAG AAGCATTAAT TGATTTCTTT
TTTATAGAAA TGCAACATAT TTTTCAAAAA AATATTTATT TTTTAGATCG TGGGACAGCG
TGCGAAGAAT CATTAGTACG ATTAAAGCGC ATTGGATTAC CCTTGAAAAT TGTGGATATG
ATTCATGCTG AACACCTAGT AACCTATCAA GGTGGGCACC CTTTATGGAA CAATTATTAT
CAATATATGT TTGATCATCT GGATGATATG GACTTAGTCG TAACAGCTAC AGAATTGCAA
GCTGAGATGA TAAAAAAACA ACTTACTCAA ATGAATATGC GAGGCGCAGA TAAAATTTGT
GCAGTACCGG TCGGTGGGGT AGCTAAATTA GAAAATCCAC GTCGCTGGCA CGGCGGTACA
GCTAATTTCG TCACCGCCTC ACGCTTACAT CCAGAAAAAA ATATACTACA AATCATAAAA
GCGATTAAAA AATTACGCGA TGAGGGGATG GATGTCACGT TAGCCATCTA CGGTTCAGGA
AACGAAAAAG AAAATATACA AAGAGCAATA GCGGAATTAG ACTTGCAATT TAGTGTGCAT
TTAAAAGGTT TGAGCCAAGA CATTATTCAT GATTTTCAAA AATATGATGC ATTTGTATCA
GCCTCTTATT CTGAGGGGTT CGGATTAACG TATATTGAAG CCATTGGGGA CGCTTTACCG
ATAGCCACCT ATGCTAACTT ATATGGTGCC CAAGAGCTTG TGTGTGAGGG AGTGAATGGG
TGTCTAGCTG ATTTTGACAG AGACAAAGCG CAAGAGCGTG CTAATATTTC CAATCTTGCT
GATGCGATGC GACGTATTTT CGATAATTAT GATCACTTAT CTGTTGGTGC TCACAAAAAG
GCACAGGAAT ATCAGACAAA TAACATCGCT GATCAGTGGC AAAAGATATG TGAGGTGCTA
ATATGA
|
|---|
| Protein sequence | MNFFVNKAIG ESNSGVEHAQ FYRAHCFREK KIEFKFIFTD LLPQLHHHMQ LWSLPENEVI
GLYDLLLSDD PDRYAKTGLT EINEYSTNSL WDLTNTQRTI VHQTTGQYTE TIFRSKSYSE
AKKLFLIDDD RVILKNGIHE IMWHYRDSGS RGKIATNIHL RNFRGKNYVF STKEALIDFF
FIEMQHIFQK NIYFLDRGTA CEESLVRLKR IGLPLKIVDM IHAEHLVTYQ GGHPLWNNYY
QYMFDHLDDM DLVVTATELQ AEMIKKQLTQ MNMRGADKIC AVPVGGVAKL ENPRRWHGGT
ANFVTASRLH PEKNILQIIK AIKKLRDEGM DVTLAIYGSG NEKENIQRAI AELDLQFSVH
LKGLSQDIIH DFQKYDAFVS ASYSEGFGLT YIEAIGDALP IATYANLYGA QELVCEGVNG
CLADFDRDKA QERANISNLA DAMRRIFDNY DHLSVGAHKK AQEYQTNNIA DQWQKICEVL
I
|
|---|
| |