| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LEUM_1853 |
|---|
| Symbol | |
|---|
| ID | 4423566 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008531 |
|---|
| Strand | - |
|---|
| Start bp | 1827687 |
|---|
| End bp | 1829303 |
|---|
| Gene Length | 1617 bp |
|---|
| Protein Length | 538 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 639675548 |
|---|
| Product | ABC-type oligopeptide transport system, periplasmic component |
|---|
| Protein accession | YP_819303 |
|---|
| Protein GI | 116618932 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.808005 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGA ATATACGTTG GGCAGCAGGA GTGATCATTG TCGCTGCTAT ATCAGGGGTT
TTGTTTACGA AGAATAATGA TGGCGATGTT AGCAAAGTGC GAACTCTGCA AGTTATGATG
AAAGACGATG TCATGACGAT GAATCCAATT ATGACTACCG ATATTTATTC AAGTCAAGCA
CAAGATCAAG TTTATGAAGG ACTTTATCGA TATAAGGGCA ATAAAGTTGT CCCTGCTATG
GCAGAAAAAA TTGTTAAACC TTCACAAAAT GGCACCGTTT ATACTTTCAA AATACGTGAT
AACGCTAAAT GGTCGAATGG CGACAAAGTT ACAGCACAAG ATTTTGTGAC TGCAATTCGT
GCAACTGCCG ATCCAAAAAC AAAATCACAA GCGTCTGCTG ATGCAATTTC AATTATGAAA
AATTATGATT CGGTGCATGT GGGTGCGATG ACACCGGATA AACTAGGCGT TAAAGCGATT
GATTCTCACA CAGTCCAAAT TACTTTAACG CAAGCAACAC CATCATTTGA TAAATTGGCA
ACTGCAATCA TTCCGGTTAA CACTAAAAAT TATGCTAAGT GGGGGAATAA GTATGGTACA
GCTTCAGAAT ACATGGTGAC TAATGGCGCA TATCAAATGA ATGGTTGGAC TGGAACAAAT
TCAAGTTTTA TGTTCACTAA AAATTCAAAT TATTGGTCAG CTAAACGTGT TCAAATTGAG
AAGGTCAAAG TTCGTGTCAT CAAAACGCCA ATGACTGCTG CCAATGAATT TAAGAATAAG
CACTTAGATA TTGCACAGTT GTCTGATGAA TATATCAAGA CTTATAAAAA TACAAAGTAC
TATCATGCTA CACCACAAGC TGTTGTTAGA GGGATATACT TTAATGAGAC GAGCGATAAA
ACGAATAATC AGCATTTGCG ACAAGCATTT GGATATTTAA TCGATCGTGA GGCTATTACG
TCTAACGTAA TGAATGATGG TTCAATGCCA CAATCAAACG CCGTGCCAAA AGGAATTATG
ACGAATCCTA TAACTGGCGC AGATTTTACT AAAGACGCTG GCACACAATT TAAGGTGGAC
AAGAAAAAAG CACAATCTGA GTGGTCTGCA TATTTGCAGA GTATTGGAAA AAATAATGCT
ACGTTTACAA TGACATTTGA CGATGATTCA ACCAGTAGAA AGGTTGGGGC GTACATTCAA
TATGCTGCTG AACACACTTT TAAGGGCATT AGCATTAATA CAAAGTATGT TCCGCATTCA
CAAGTTGTCT CAGAAGTGTT AAAACAGGAT TTTGATATGG TAAATATTGG TTTAAGTGTT
AATGTACCGG ATGCAGCATA TCCATTGGCA ATTGGAAAAA CCGGATATGG ATTGAATTTT
TCAAAGGTCA GTGATAAGAC ATACGATGGG TATCTAACAA TGGCAGCGAC ACAAGTAAGT
GATACTAAAA AACGCTATGA AACATTACAG GTCGCCAATG AATACTTCAC CAAAATAAAA
GCATATATGG TACCGATATA TCAACCGGTG ACAGCCAACG TTGTTACCGA TAAAATTGGT
GGATTTAAAG GTAATAGTTT TCATTCGCCA GCATATCAGG ATATGTATTG GAAATAA
|
|---|
| Protein sequence | MNKNIRWAAG VIIVAAISGV LFTKNNDGDV SKVRTLQVMM KDDVMTMNPI MTTDIYSSQA
QDQVYEGLYR YKGNKVVPAM AEKIVKPSQN GTVYTFKIRD NAKWSNGDKV TAQDFVTAIR
ATADPKTKSQ ASADAISIMK NYDSVHVGAM TPDKLGVKAI DSHTVQITLT QATPSFDKLA
TAIIPVNTKN YAKWGNKYGT ASEYMVTNGA YQMNGWTGTN SSFMFTKNSN YWSAKRVQIE
KVKVRVIKTP MTAANEFKNK HLDIAQLSDE YIKTYKNTKY YHATPQAVVR GIYFNETSDK
TNNQHLRQAF GYLIDREAIT SNVMNDGSMP QSNAVPKGIM TNPITGADFT KDAGTQFKVD
KKKAQSEWSA YLQSIGKNNA TFTMTFDDDS TSRKVGAYIQ YAAEHTFKGI SINTKYVPHS
QVVSEVLKQD FDMVNIGLSV NVPDAAYPLA IGKTGYGLNF SKVSDKTYDG YLTMAATQVS
DTKKRYETLQ VANEYFTKIK AYMVPIYQPV TANVVTDKIG GFKGNSFHSP AYQDMYWK
|
|---|
| |