| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LEUM_1840 |
|---|
| Symbol | |
|---|
| ID | 4423950 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008531 |
|---|
| Strand | + |
|---|
| Start bp | 1812439 |
|---|
| End bp | 1813839 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639675535 |
|---|
| Product | amino acid transporter |
|---|
| Protein accession | YP_819290 |
|---|
| Protein GI | 116618919 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCACTTC TTGCGCGAGC TTTTAAGCGG GAATCTGTTG ATAATTACCT GAGTGCAGAT
TCACATATGT CGCGTGTTTT AACAACGCGC GACTTGATTA GTCTAGGAGT AGGCACAGTC
ATTGGTACAG GAATATTTAT TTTACCCGGC CACGAAGCCG CTGATCATGC AGGTCCAGCA
GTCGCTATTG CATTTCTAAT TGCTGCAATT TTCTCTGGAT TATCAGGTAT GGCTTTTGCT
GAGTTCTCAG CAGCCATGCC AGTTGCTGGC TCAGCTTACT CATACGGGGG TGCTATTTAC
GGAGAAATCA TTGGTTGGCT ATTGGGTTGG TCATTAATTG TTGAATATTT CTTAGCAGTA
TCAGCAATTG CAACCGGATT TTCAGCCTAC CTTGGTAATT TATTAGCTAT ATTTGGCATT
CACATCCCTA AATATCTATC TGCCGGTCCA ATGGAGGGCG GAATTGTCAA TTTATTTGCA
GTATTAATTA TTTTATTCGT CGCTGCTATA CTATCACGAG GATTAAACAC CTCAAAGAAA
GTTGAAAATG GCGCAGTCGT TATCAAAATT GCCATTTTAA TCTTGTTCAT TGTTGGCGGA
TCATTTTTTA TTAAAACAAG CAATTATGTA CCATTTTACC CTAAAGAATT TCACAGTGGA
TTGGGCGGTT TGAACGGAAT TTGGGCCGCA ACCGCCAGCA TTATTTTTGC TTTTCTAGGC
TTTGATACCA TCGCCGCCCA CGCTGCTGAA GTTAAGAACC CACAAAAGAC AATGGCCAAG
GGTATTGTTG GTACGGTTAT TATTTCAGCC CTATTATATA CACTCTTCTC TATAGTGTTA
ACGGGAATTG TCAATTATAA AAAACTTGGT GTTGATGACC CAGCAGCATT TGCTCTGCAA
GTTGTCCATC AAACACAGTT CTCTATCGTC ATTACTATTG GTGCGTTAAT CGGTATGTTC
ACAGCTGTAT TAGCCTTGAT CTATGCTTCA TCCCGTTTAA CTTATTCCTT CGGGCGTGAC
GGTTTGCTCC CCCGCAGCCT AGGTAAAATA TCCCCAGGAT CGCATTTACC AGTAAATGCA
CTAATTTTGG CAGTTGCCGT TGAGGTTATT TTTGCGGGCC TTATCCCCCT CAGCACATTG
GCTAGTTTAA TTAATGCAGG TACTTTAACA GCATTCGCCT TTATCAATTT TGGTATCTTA
ATCCTTCGTC GTCGTAAAGA TTTAGCTCAC GATGGTTTCA AAGTACCTGG CTATCCAATT
GTACCGTTTA TTGCGGGTAT GATAAGTTTG TTCTTTATTA CACAGCTATC TGCCGAGACA
CTCAAAATGT TTGGCCTCTG GTTACTACTT GGTGTTATCT GGTACTTCTC CTATGGCATT
AAGCATTCTA AATTATCATA A
|
|---|
| Protein sequence | MSLLARAFKR ESVDNYLSAD SHMSRVLTTR DLISLGVGTV IGTGIFILPG HEAADHAGPA
VAIAFLIAAI FSGLSGMAFA EFSAAMPVAG SAYSYGGAIY GEIIGWLLGW SLIVEYFLAV
SAIATGFSAY LGNLLAIFGI HIPKYLSAGP MEGGIVNLFA VLIILFVAAI LSRGLNTSKK
VENGAVVIKI AILILFIVGG SFFIKTSNYV PFYPKEFHSG LGGLNGIWAA TASIIFAFLG
FDTIAAHAAE VKNPQKTMAK GIVGTVIISA LLYTLFSIVL TGIVNYKKLG VDDPAAFALQ
VVHQTQFSIV ITIGALIGMF TAVLALIYAS SRLTYSFGRD GLLPRSLGKI SPGSHLPVNA
LILAVAVEVI FAGLIPLSTL ASLINAGTLT AFAFINFGIL ILRRRKDLAH DGFKVPGYPI
VPFIAGMISL FFITQLSAET LKMFGLWLLL GVIWYFSYGI KHSKLS
|
|---|
| |