Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LEUM_1752 |
Symbol | |
ID | 4423464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
Kingdom | Bacteria |
Replicon accession | NC_008531 |
Strand | - |
Start bp | 1721932 |
End bp | 1726476 |
Gene Length | 4545 bp |
Protein Length | 1514 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639675447 |
Product | glycosyl hydrolase |
Protein accession | YP_819212 |
Protein GI | 116618841 |
COG category | [R] General function prediction only |
COG ID | [COG5263] FOG: Glucan-binding domain (YG repeat) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGAAATA GAAATGCAAC AAGCGTTTTC CGGAAAAAGA TGTATAAATC TGGGAAAATG TTAGTCATTG CAGGGAGTGT TTCAATAATT GGTGTTACCA GTTTTATTCA ACAAGCACAA GCTGATGTTT CACAAAACAA TGGGGTAGTA GTGGCCACGG CAGTCGATCA ATCGAATTTG GATGCGACTA CGTCTGACAA ATCAATCACA ACAGATGATA AAGCTGCAAC AACAGCAGCT ACATCAACAG ATGATAAGGC TACAACAACA GTAGCTACAT CAACAGATGA TAAGGATACA ACAACAGCAG CTACATCAAC AGATGATAAG GCTACAACAA CAGTAGCTAC ATCAACAGAT GATAAGGCTA CAACAACAGC AGCTACATCA ACAGATGATA AAGCTGCAAC AACAGCAGCT ACATCAACGG ATGATAAAGC TGCAACAACA GCAGCTACAT CAACGGATGA TAAAGCTGCA ACAACAGCAG ATACATCAAC AGATGATAAA GCTGCAACAA CAGCAGCTAC ATCAACAGAT GATAAGGCTA CAACAACAGC AGCTACATCA ACAGATGATA AAACAGCAAC AACAGTCGGC ACATCTGATA ATAACAATTC AGCTACAGCG AGCGATAAAG ATGTAAGTTC ATCGGCACAA AAAAGTCAAA CGATTGATAA CAATTCGAAG ACGGCCGATA CTACTGCAGC ATTAGAAGCT AGTTCAAAGA ATCTGAAAAC GATTGATGGC AAAACATATT ATTACGACGA TGATGATCAA GTAAAAAAGA ACTTTGCTAC CGTAATTGAT GGTAAGGTAC TTTATTTTGA TAAAGAGACT GGCGCATTAG CTGATACAAA TGACTATCAA TTTTTAGAAG GATTGACTAG TGAAAATAAT ACTTATACGG AGCATAATGC CTCAGTTGGT ACATCTTCTG ATAGTTATAC AAACGTTGAC GGGTACCTAA CAGCCGACAG TTGGTACAGG CCTAAGGACA TATTAGTCAA CGGTCAAAAC TGGGAATCAT CAAAGGATGA CGATTTACGA CCATTGTTAA TGACTTGGTG GCCAGATAAG GCAACACAAG TAAACTATTT GAATGCGATG AAGTATTTAG ATGCCACTGA AACGGAAACT GTTTATACTT CAGATGACAG TCAAGACGCT TTGAACAAAG CAGCACAGAA CATTCAAGTG AAAATTGAAG AAAAAATTAG TCAAGAAGGC CAAACACAAT GGCTAAAGGA TGATATTTCA AAATTTGTTG ATAGCCAATC AAATTGGAAT ATTGCTAGTG AATCAAAAGG AACTGATCAT TTGCAAGGTG GTGCATTGTT GTATGTCAAT AGTGATAAAA CACCAGATGC CAATTCTGAT TATCGATTAC TTAATCGCAC ACCAACAAAT CAAACAGGCA CGCCTTTGTA TACGACAGAT CCAACTCAAG GTGGTTATGA CTTCCTCTTG GCCAATGATG TGGATAATTC AAACCCAGTT GTTCAAGCAG AACAACTAAA TTGGATGTAT TACTTGTTAA ACTTTGGATC AATTACTAAT AACGATGCAG ATGCTAACTT TGATAGTATT CGAGTAGATG CTGTTGATAA CGTTGATGCC GACTTATTGC AAATTGCAGC TGATTATTTC AAGGCAGCAT ATGGCGTCGA TAAGAGTGAT GCAATTTCGA ATCAACATGT TTCCATTCTT GAAGATTGGA GTGACAATGA TGCTGAATAT GTGAAAGACA ATGGCGACAA TCAATTGTCA ATGGATAATA AATTGCGTTT GTCATTAAAA TACTCACTCA CTATGCCAGC AGTCGATCAA TATGGTAATA AAAGAAGTGG ATTAGAACCT TTTTTGACAA ATAGTTTAGT TGATCGTACA AATGATTCGA CAGATAATAC CGCACAACCA AATTATTCTT TTGTTCGTGC ACATGATAGT GAAGTACAAA CAGTTATTGC TGAAATTATT AAACAAAGAA TTGATCCGGA TTCTGATGGC TTATCACCAA CGATGGACCA ATTAACAGAA GCGTTTAAAA TTTATAATGC TGATCAGTTG AAAACGGATA AAGAATTCAC ACAATATAAC ATTCCAAGTA CTTATGCCAC AATACTAACG AATAAAGATA CAGTGCCACG TGTGTACTAT GGTGATATGT ATACAGATGA TGGTCAATAC ATGGCAACAA AGTCACTTTA TTACGATGCA ATTGATACTT TGCTGAAGTC TCGTATCAAG TATGTTTCTG GCGGGCAAAC AATGTCTATG AAATATATGC AAGGTGATAG TAGTATGGCT GCTGACAGTT ATAGAGGCAT TTTGACATCA GTTCGTTATG GTAATGGTGC CATGACTGCT ACCGATGCAG GGACAAATGA AACACGTACG CAAGGTATTG CAGTAATTGA AAGTAATAAC CCAGATTTGA AGTTGAGCAG TACAGATCAA GTAGTTGTAG ATATGGGCAT AGCGCACAAA AACCAGGCTT ATCGTCCTGC TTTGTTAACA ACTAAAGATG GCATAGATAC TTATGTATCT GATAGTGATG TCTCACAAAG CTTAATAAGA TATACAAATA GTAATGGGCA ACTTATTTTC AATAGTTCAG ATATTGTTGG TACAGCAAAT CCACAAGTTT CTGGATACTT GGCTGTCTGG GTACCCGTTG GTGCTTCAGA TACTCAAGAT GCGCGAACTG AAAGTAGTAC AGCAACAACT GCTGATGGAC AAACATTACA TTCAAATGCC GCACTTGATT CTCAAGTTAT TTATGAAAGT TTCTCTAACT TCCAATCTAC ACCAACAACA GAAGCTGAAT ATGCTAATGT GCAAATTGCA AACAATACTG ATTTATACAA GAGTTGGGGA ATTACGAACT TCGAGTTTCC ACCACAATAT CGTTCAAGTA CGGATAGTAG TTTCTTAGAT TCAATTATTC AAAATGGTTA TGCATTTACT GATCGTTATG ATCTTGGATT CAATACACCA ACGAAGTATG GTACTGTAGA TCAACTCCGT ACAGCTATTA AAGCTTTGCA TGCGACAGGT ATCAAGGCAA TGGCAGATTG GGTACCAGAC CAGATTTATA ATTTGACAGG TAAAGAAGTG GTTGCGGTAC AACGTGTCAA CAACTCAGGA ATCTATAATC AAGATTCTGT AATTAATAAA ACATTATATG CTTCACAAAC CGTTGGTGGC GGAGAATATC AGGCACTATA TGGTGGAGAG TTCCTTGATG AAATCAAGAA ATTGTACCCT TCTCTATTCG AAAAAAATCA AATTTCAACC GGCGTACCAA TGGATGCTAG TGAAAAGATA AAAGAATGGT CCGCTAAGTA CTTTAACGGT ACTAACATTC AAGGTCGTGG TGCTTACTAT GTCCTTAAGG ACTGGGCTAC AAATGAGTAC TTCAAGGTAA GCACTTCAAG CAACAGCAGT GTATTTTTGC CAAAGCAGTT GACGAATGAA GAATCAAACA CTGGATTTAT TTCAACTGAT GGTGGGATGA CATATTATTC TACAAGTGGA TACCAGGCAA AAGATACATT CATCCAAGAT GACAAATCTA ATTGGTATTA CTTTGACAAG AATGGTTATA TGACATATGG TTTCCAGACA GTCAATGATA ATAATTATTA CTTCTTGCCT AATGGTATTG AATTACAAGA TGCTATCTTA GAAGATAGTA AAGGAAATGT TTATTATTTC AATCAATATG GCAAACAAGC TGTTGATGGA TACTACATGT TGGCTAATAA AACTTGGCGT TACTTTGACA AAAATGGTGT TATGGCTAAT GCTGGCTTAA CAACCGTGAC TGTTGATGGG CAGGAGCATA TCCAATACTT TGATAAGAAC GGTATTCAGG TCAAAGGGAC TTCCGTGAAA GATGCAGACG GAAAGCTACG CTACTTTGAC ACTGATTCTG GTGATATGGT GACGAACCGC TTTGGTGAAA ACACAGATGG TACATGGTCA TACTTTGGTG CTGACGGTAT CGCTGTAACT GGTGCACAGA CAATTAGTGG GCAAAAATTG TTCTTTGATG CCGACGGACA ACAGATTAAA GGTAAGGAAG CGACTGATAA AAAAGGCAAA GTGCATTATT ATGATGCTAA TTCTGGTGAA ATGATCACTA ATCGTTTTGA AAAGTTATCA GATGGATCAT GGGCGTACTT TAATAAAAAA GGTAACATCG TAACCGGCGC ACAAGTCATT AATGGTCAAC ATTTGTTCTT TGAAAGCAAC GGTAACCAAG TTAAGGGTCG TGAATACACG GCTACTGATG GGAAGATGCG CTACTATGAT GCAGATTCTG GTGATATGGT GACGAATCGC TTTGAACGAA TATCAGACGG ATCATGGGCA TATTTTGGTG CTAATGGTGT TGCTGTAACT GGGGAACAAA ATATAAATGG ACAACAACTG TATTTTGATG CCAATGGTCA TCAAGTTAAG GGAGCCGCAG TAACACAAGC TGACGGTAGC CAAAAATATT ATGACGCAAA TTCTGGAGAG ATGATTAAAA GCTAA
|
Protein sequence | MRNRNATSVF RKKMYKSGKM LVIAGSVSII GVTSFIQQAQ ADVSQNNGVV VATAVDQSNL DATTSDKSIT TDDKAATTAA TSTDDKATTT VATSTDDKDT TTAATSTDDK ATTTVATSTD DKATTTAATS TDDKAATTAA TSTDDKAATT AATSTDDKAA TTADTSTDDK AATTAATSTD DKATTTAATS TDDKTATTVG TSDNNNSATA SDKDVSSSAQ KSQTIDNNSK TADTTAALEA SSKNLKTIDG KTYYYDDDDQ VKKNFATVID GKVLYFDKET GALADTNDYQ FLEGLTSENN TYTEHNASVG TSSDSYTNVD GYLTADSWYR PKDILVNGQN WESSKDDDLR PLLMTWWPDK ATQVNYLNAM KYLDATETET VYTSDDSQDA LNKAAQNIQV KIEEKISQEG QTQWLKDDIS KFVDSQSNWN IASESKGTDH LQGGALLYVN SDKTPDANSD YRLLNRTPTN QTGTPLYTTD PTQGGYDFLL ANDVDNSNPV VQAEQLNWMY YLLNFGSITN NDADANFDSI RVDAVDNVDA DLLQIAADYF KAAYGVDKSD AISNQHVSIL EDWSDNDAEY VKDNGDNQLS MDNKLRLSLK YSLTMPAVDQ YGNKRSGLEP FLTNSLVDRT NDSTDNTAQP NYSFVRAHDS EVQTVIAEII KQRIDPDSDG LSPTMDQLTE AFKIYNADQL KTDKEFTQYN IPSTYATILT NKDTVPRVYY GDMYTDDGQY MATKSLYYDA IDTLLKSRIK YVSGGQTMSM KYMQGDSSMA ADSYRGILTS VRYGNGAMTA TDAGTNETRT QGIAVIESNN PDLKLSSTDQ VVVDMGIAHK NQAYRPALLT TKDGIDTYVS DSDVSQSLIR YTNSNGQLIF NSSDIVGTAN PQVSGYLAVW VPVGASDTQD ARTESSTATT ADGQTLHSNA ALDSQVIYES FSNFQSTPTT EAEYANVQIA NNTDLYKSWG ITNFEFPPQY RSSTDSSFLD SIIQNGYAFT DRYDLGFNTP TKYGTVDQLR TAIKALHATG IKAMADWVPD QIYNLTGKEV VAVQRVNNSG IYNQDSVINK TLYASQTVGG GEYQALYGGE FLDEIKKLYP SLFEKNQIST GVPMDASEKI KEWSAKYFNG TNIQGRGAYY VLKDWATNEY FKVSTSSNSS VFLPKQLTNE ESNTGFISTD GGMTYYSTSG YQAKDTFIQD DKSNWYYFDK NGYMTYGFQT VNDNNYYFLP NGIELQDAIL EDSKGNVYYF NQYGKQAVDG YYMLANKTWR YFDKNGVMAN AGLTTVTVDG QEHIQYFDKN GIQVKGTSVK DADGKLRYFD TDSGDMVTNR FGENTDGTWS YFGADGIAVT GAQTISGQKL FFDADGQQIK GKEATDKKGK VHYYDANSGE MITNRFEKLS DGSWAYFNKK GNIVTGAQVI NGQHLFFESN GNQVKGREYT ATDGKMRYYD ADSGDMVTNR FERISDGSWA YFGANGVAVT GEQNINGQQL YFDANGHQVK GAAVTQADGS QKYYDANSGE MIKS
|
| |