| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LEUM_1645 |
|---|
| Symbol | |
|---|
| ID | 4423375 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008531 |
|---|
| Strand | - |
|---|
| Start bp | 1642164 |
|---|
| End bp | 1643327 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639675340 |
|---|
| Product | phage phi-C31 gp36 major capsid-like protein |
|---|
| Protein accession | YP_819110 |
|---|
| Protein GI | 116618739 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01554] phage major capsid protein, HK97 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAAG AACAACTACA AGCGGCATTC CGTGACGCTA GCACCAAGGC ATCTGATTTG
AATGCTAAAT TGAACAACAT GGTTCAAGAT GATTCTGCTT CAGTAGAAGA TATTAAGAAG
GCTCAAGATG ACTTGACGGA CGCTAAGACA CGCCGTGATA TTTTGAACTC TCAACTCAAG
AGCTTTGAAG ACGTCGAACC AGAGCCTAAA AAGCCTGGTA AAAAGACTAA TATTTTGGAC
AATAAGGCCG CTGAACTTGC TGCAAAAAAG CAAGGCATTA ATGATTTCAT TCATTCTCGC
GGTGCAAAGA TTTCAGATGC AGTTGCTTCA CAAGTTACTT CGTCAGAAGT TGGTGTATTG
ATTCCAGAAG AAATTATTTA TGATCCATCT GCTGAAGTTA ACTCAGTTGT TGACTTATCA
ACTTTGGTTA ACAAGACACC AGTTACTACT CCAAGTGGTA AGTATCCTAT TTTGCAACGT
GCAACCGATC GTTTCAATTC TGTTAAGGAA TTAGCAGAAA ACCCTGCTTT AGCTGAACCT
ACTTTCAAGG AAGTAGACTG GTCTGTCGAT ACTTATCGTG GTGCAATTCC TCTTTCAGAA
GAATCAATTG CTGACACACA AGTCGATTTG ACAGCATTGG TTGGTCAATC AATCGGTGAA
AAGAAGGTTA ACACTTATAA CGCCTTAATT GCACCAGTTT TGCAAGCATT TACTGCTAAG
TCAACTACGA GTGATACATT AGCTGACCAA GTAAAGCACA TTTTGAATGT TGATTTAGAT
ACAGCTTATG CACGTGTTAT TATTGCTAGC CAATCATTCT ACAATGCCGT TGACACATTG
AAAGATAAGA ACGGACGTTA CTTACTTCAA GAATCAACTG CATCATTAGC ACAAGCATCC
GGAAAGACGT TGCTGGGAGT ACCGGTTTAT GTGATTGGTG ATGAACTATT TGGTAACGCT
GGTGACCAAA AAGCATTTAT CGGTGACACA AAGCGTGGTG TTCTATTCCC TAACCGTCAA
GAAATTACTT TGGCTTGGGA AGACAGCAAA ATTTATGGCC GTTACCTAGG TGCTGCTTTC
CGATTTGGAG TTAAGCAAGC TGATGACAAA GCCGGTTACT TTATTACTAA CACGGCTACT
CCTGCATCTG GCAGTGGCGA ATAA
|
|---|
| Protein sequence | MTKEQLQAAF RDASTKASDL NAKLNNMVQD DSASVEDIKK AQDDLTDAKT RRDILNSQLK
SFEDVEPEPK KPGKKTNILD NKAAELAAKK QGINDFIHSR GAKISDAVAS QVTSSEVGVL
IPEEIIYDPS AEVNSVVDLS TLVNKTPVTT PSGKYPILQR ATDRFNSVKE LAENPALAEP
TFKEVDWSVD TYRGAIPLSE ESIADTQVDL TALVGQSIGE KKVNTYNALI APVLQAFTAK
STTSDTLADQ VKHILNVDLD TAYARVIIAS QSFYNAVDTL KDKNGRYLLQ ESTASLAQAS
GKTLLGVPVY VIGDELFGNA GDQKAFIGDT KRGVLFPNRQ EITLAWEDSK IYGRYLGAAF
RFGVKQADDK AGYFITNTAT PASGSGE
|
|---|
| |