| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LEUM_1577 |
|---|
| Symbol | |
|---|
| ID | 4423307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008531 |
|---|
| Strand | - |
|---|
| Start bp | 1580441 |
|---|
| End bp | 1581835 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 639675272 |
|---|
| Product | tRNA (uracil-5-)-methyltransferase related enzyme |
|---|
| Protein accession | YP_819042 |
|---|
| Protein GI | 116618671 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
|---|
| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAAAG CTAATCGAGT ATATAAAACC AAAGCACCAG TAGCTAAAAA TCAGGAAATT
GAAGCAACCG TGATTGATAT TACATATCAA GGCATGGGTG TTGTTAAGGT TGATAATTTT
CCGATATTTG TAGTTGATGC TATTCCGGGA GAAATTGTCC GCGTGAGTGT CACAAAAGTA
CTAAAAAGCT ACGCATTTGG GCGTGTAACA AGACGTATTC AGGAATCCGA AAATCGCGTT
CAAAATGCCA ACAAAATAGC AATTACCACA GGCATTGCAC CGCTAGCCAA TTTGAAATAT
GAGGCACAAC TGGCGTTTAA ACAGCATCAA ATTGAAGAAT TATTTAAAAA GGTTAATGTA
GATGTTGATG TGGCGCCGAC TATTGGTATG GAAAATCCAA CAGGGTACCG TAATAAGGCA
CAAGTACCTG TGCAAATGAT AAATGGTAAA TTAGAAACAG GTTTTTATCG TCGTGGGTCA
CATCGTTTAG TGCCAATTGA AGATTTTTAT ATTCAAGATC CCAAGGTTGA TGAAGCAGTT
CGTATTACGC GAGACATTTT ACGTGAATTA GGTGTTTCCG CGTATGAAGA AGAAACTAAA
AAAGGCGTTA TTCGTCATAT TATGGCACGA CGGGGCTATT ATTCACATGA ATTAATGGTT
GTTATCATCA CGAATACTAA AAAGCTGCCT AATAGCGACT TAATTGCCGA AAAACTCAGT
GCAAAACTAC CTGAATTAAA GAGTGTTATC CACAATATCA ATAATCACGA TACCAATGTG
ATTATGGGAC AATGGAATGA AACGATTTGG GGTGAAGACG ATATTCACGA TCAATTAATG
GGTAAAGACT TTGTTATTGG GCCAAACTCT TTCTATCAGG TCAATCCTCA AACCACTTCG
ACCTTGTATG CGCTCGCAGC TGAAAAGGCT AATTTGAAAC CGACTGATGT TGTTGTTGAC
GCTTATTCTG GTATTGGAAC AATTACGTTA TCTGTTGCGG ATAAAGTGAA AAAAATATAT
GGTGTTGATG TTGTTGAAGG AGCAATTGAA GATGCTGAAA AAAACGCCAA AAATAATCAA
ATTACAAATG CCGAATTTGT ATTGGCTGAC GCACCAGAGC AAATGGCAAA ATGGGCGGAT
GAAGGATTAA AGCCAAATGT TGTCTTTGTT GATCCACCAC GCAAAGGGTT AACACAAGAA
TTGATTGATG CAGTTAAAGC AATGAATCCT GAAAAATTTG TATATATAAG TTGCAACCCA
GCAACACTTG CGCGTGATGC TGTTCAAATT TTGGCTGCAG GATTTGAAAT CGAAGGTGCA
GTTCAACCAC TGGATCAATT CCCACAAACA ACTCACGTTG AAAGCATTAC AGTTTTCAAA
AAAGCTGAAA ATTAA
|
|---|
| Protein sequence | MAKANRVYKT KAPVAKNQEI EATVIDITYQ GMGVVKVDNF PIFVVDAIPG EIVRVSVTKV
LKSYAFGRVT RRIQESENRV QNANKIAITT GIAPLANLKY EAQLAFKQHQ IEELFKKVNV
DVDVAPTIGM ENPTGYRNKA QVPVQMINGK LETGFYRRGS HRLVPIEDFY IQDPKVDEAV
RITRDILREL GVSAYEEETK KGVIRHIMAR RGYYSHELMV VIITNTKKLP NSDLIAEKLS
AKLPELKSVI HNINNHDTNV IMGQWNETIW GEDDIHDQLM GKDFVIGPNS FYQVNPQTTS
TLYALAAEKA NLKPTDVVVD AYSGIGTITL SVADKVKKIY GVDVVEGAIE DAEKNAKNNQ
ITNAEFVLAD APEQMAKWAD EGLKPNVVFV DPPRKGLTQE LIDAVKAMNP EKFVYISCNP
ATLARDAVQI LAAGFEIEGA VQPLDQFPQT THVESITVFK KAEN
|
|---|
| |