Gene LEUM_1564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLEUM_1564 
Symbol 
ID4423294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeuconostoc mesenteroides subsp. mesenteroides ATCC 8293 
KingdomBacteria 
Replicon accessionNC_008531 
Strand
Start bp1563051 
End bp1566608 
Gene Length3558 bp 
Protein Length1185 aa 
Translation table11 
GC content38% 
IMG OID639675259 
Productcondensin subunit Smc 
Protein accessionYP_819029 
Protein GI116618658 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1196] Chromosome segregation ATPases 
TIGRFAM ID[TIGR02168] chromosome segregation protein SMC, common bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTAA AATCACTTGA AATTAGCGGA TTTAAATCAT TTGCTGATAA GACAATGATT 
GAACTAATGC CGGGGATGAC CGGTATTATT GGACCTAACG GTTCAGGAAA ATCAAACATC
ATTGAAGCGA TTCAATGGGT GATGGGTGAA CAATCTGCCA AAGATTTGCG TGGGACAAAG
ATGTCCGACG TTATTTTTGG TGGTACCGAT AAACGTGGTG CGTTGAATCG CGCTGAAGTG
TCAATTACTT TTGATAATTC TGATCACTAT GTACAATCTG ATTTTAATGA AATTCGAATT
ACGCGAAAGT TGTATCGATC AGGTGAAAGT TCCTATTTAA TTAATGGTGT TGAGAGCCGG
TTGAGAGATA TTCATGAATT GTTTATGGAT ACTGGTTTGG GACGTGAAAG TTTTTCAATA
ATATCCCAAG GACGAGTTGA AAGTATTTTC AATGCAAAAC CTGAAGATCG ACGCGGCATT
ATTGAAGAAG TCGCCGGCGT GTATAAATAC AAGCAAAATA AAGAAAAGGC GCAAAAAGAA
TTAACCCAGA CAAGTGATAA TTTGTCACGT GTGGCAGATA TTATTCATGA GATTGAAAGT
CGAATTGATC CATTAGCGGA GCAGGCGGCA GAAGCAACAG ATTATTTAGC TCAAAAAGAA
CGTTTTGATA CGTTAGACAA GGCGCGATTG GCATGGTCAA TTCATGATCT TAATGGTCAA
ATATCATCAA CGACCAAACA AGTAGAAACA CATGACAAAC GTGTTAACCA GACGAAGCTA
GCACTAGATG TTGTCAATAA AAAATTATTG GACAAACGTC AAGAACGTGT TAGTGCACAA
TTGTCACGAG ATAGCTTACA GGCTACAATT CTAGAGTGTA CTCAAAAACG TGAACGTTTG
ATTGGCGCTA AAAATTTAGG AGCACAGCAA ATTTCAACGC TAAATAGAGA TGTTGAAAGT
GCTAAAAAAC AAGAGTTTGA TTTACAAAAT CGTGTTCGGA AATTAGATGA ACAAATTAGC
CAAGTAGAAA AACAAAATGA TGGGTTACAA AAACAATACC AACAACTAAA AATTAGTCTG
GGACAATTCG ATACAAGTGT ACAAGTTGAG TTACAACGTG AAATACAAAG CAAAATTGAA
GTAAATCGAC ATCATTATAT TCAAACAATG CAGGATATAG CTACACTGCA TAACACGCAA
AAAAATGACG AAAAGCTATT ACAGCAGCTA GAAAGTCGTC AAAAAGTGTT GTCAGTCCGT
CTTGATAATG AAAACAAAGA GTTAACAGCT ATTCAAAGAA CGTTTAACAA AAAAGTACCA
AATAGTGATC ATAATGATGT AAACATTACA GAACTTGAAA AAAATGTAGC AGATTTAAAG
AAAGACATTG GTAATGCAGC AAAAATATAT AAGTCCACAG AGCAAAATTG GTACAAGGTA
TTAGATGAAT TAAACAAGGC ACGTAGTCAT CGCGATGCAC TCAATTCATT AGACGAGTAT
GCTGGCTTTT ATCAAGGTGT TCGCGCGCTG ATGAAGCCAC AAACTTTAGA AAAATTTAGT
GGTATTAAAG GGGTTATTGC TGAATTAATG ACCGTTCCCA GTCGTTATGC TTTGGCAATT
GAAACCGTAT TAGGTGGTGT GTTACAACAG GTTGTAGTAG ATAATACATC AACGGCCAAG
CAGGTTATTT CTTATTTAAC AAAAAACCGG GCGGGACGTG TTACAATTTT ACCAATGGAT
ACCATCAAAT CACGTCACTT AAGCGGTCTG GAAGCAGTGC AACACATGGA TGGTTTTATA
GGAGTTGCCG CGAATTTGAT TGATATGCCT GAGGAAATGT CTGCTATTAA AGCCAACATA
TTAGGGACAA CCGTTTTGGC GGAAAATTTA AATCAAGCAA CTGAAATTGC CAAACGTGGA
CATTTTCGTT TTCGCGTGGT AAGTCTAAGT GGCCAAGTTG TTAATGCTGG TGGTTCTATG
ACAGGTGGCG CAACTCAAAA ACGTGGCGCA ACCTTATTGA GTCGTCAATC TGATATTGCT
GAATTAAGTG AACGTGCAGA TGAATTATCT GTTCAAGCAA GAACATTAGA AGAAACACTG
CAGTTGAAAC GTTCAACTGG TGAACAGTTA CAAGAAAAAC TACTTTTGGC ACAAGAATCA
TTGCGAGCAG CTCAAAATGA TACTAAAAAA ATTGATTATG AGTTATCGCG GCAACAGGAT
GCTATAAAGC AACAAAAAAG AGCCGTGCAA GCTATTGAAT ATGAATTGAA AGAAGTAAGC
GAACAACAAC TAGAACTGAA AAATCGCATA GTAGAGTTTA GTACTAAAAT CGAAAATATT
GAACAACAAA AACTGGATCA AGAACAGCTG ACTGCCAAAT TAGCTCATGA CTTAGAGACA
GCTTCAATAA AATCACAATC AACAAATGAA GAAAAAGCCA CGTTGCAAAC TCAGTTTGCA
ACAGTTGGTG CTCAGCTTGA CAGTATTAAT GGCCAGTTGA GTTTATTACA GAATCAACGT
AATGAACTAC AGAGAGAGCA TAGTACTGTA GAAGAAAACT TAAAAAATCT GCAAAAACAA
TTGGCTATAG CGCAAGGTAA TGTAGCTAAT CAAAGTATAA TTGATGATAT GTCGCATCAA
CTTGATGCCA CACAAGAAAA GTATGACAAT ATTAATACAC AAATCGTGGC TTTGACGAAC
AGCATCACGG ATTTGGAAGA GCAATTTGCA ACGCAACAGG AGACTTTGAG AACGCTTATT
GGATCACAAA GTCAGTCTGC AGCGCACTTG GCTCGTTTGC AGACACAGAT AGAAAATCTG
CAAACGCAAT TACTGACGCA GTACGATGTT GGCGATGTGG AAGCTTTGTA CCAAAAAGTT
GCTGACATGG ATTTCCAAAA TATTACCGAA CAGTTGCGCT TAGTTAAACG TAGTTTAGAT
GAAATTGGCA ATGTTAACAT TGGAGCTATT GAAGAGTATG AGTCTGTAAA AACACGATTT
GAATTTTTGA CAAAACAACG CGATGATTTG AACTCAGCTA AAGAAACGCT GCTACAAACA
ATTGATGAAA TGGACAAGGA AGTACAAGTT CGTTTTAAAA AGACTTTTGA TGCAGTTGCG
GCACATTTTT CAGATATTTA TGCCAAAATG TTTGGCGGTG GTCGTGCAGA AATTAGCTTA
ACAGATCCAG CCCATTTATT AACAACCGGT ATTGATATAA CAGCGCAACC TCCTGGTAAA
AAGTTCCAGC AAATGAGTTT GTTGTCTGGT GGTGAAAAAG CATTGACTGC GATTACGCTG
TTATTTGCTA TTTTGCACGT TCGCCCTGTT CCTTTTGTTG TGCTTGATGA AGCCGAAGCT
GCGTTGGATG AAGCAAATGT GGCGCGTTTT GCTAGATATT TACGTGAATT TGCTGGTGAT
ACACAATTTA TCGTTATTAC GCACCGTAAG GGGACGATGG TGAATGCTAA TTTGTTATAT
GGTGTGACGA TGCAAGAAGC TGGCGTGTCA AAAATGGTCT CAGTTGATTT AGATCGAATG
GAAGAAGCAG TTTCATAA
 
Protein sequence
MKLKSLEISG FKSFADKTMI ELMPGMTGII GPNGSGKSNI IEAIQWVMGE QSAKDLRGTK 
MSDVIFGGTD KRGALNRAEV SITFDNSDHY VQSDFNEIRI TRKLYRSGES SYLINGVESR
LRDIHELFMD TGLGRESFSI ISQGRVESIF NAKPEDRRGI IEEVAGVYKY KQNKEKAQKE
LTQTSDNLSR VADIIHEIES RIDPLAEQAA EATDYLAQKE RFDTLDKARL AWSIHDLNGQ
ISSTTKQVET HDKRVNQTKL ALDVVNKKLL DKRQERVSAQ LSRDSLQATI LECTQKRERL
IGAKNLGAQQ ISTLNRDVES AKKQEFDLQN RVRKLDEQIS QVEKQNDGLQ KQYQQLKISL
GQFDTSVQVE LQREIQSKIE VNRHHYIQTM QDIATLHNTQ KNDEKLLQQL ESRQKVLSVR
LDNENKELTA IQRTFNKKVP NSDHNDVNIT ELEKNVADLK KDIGNAAKIY KSTEQNWYKV
LDELNKARSH RDALNSLDEY AGFYQGVRAL MKPQTLEKFS GIKGVIAELM TVPSRYALAI
ETVLGGVLQQ VVVDNTSTAK QVISYLTKNR AGRVTILPMD TIKSRHLSGL EAVQHMDGFI
GVAANLIDMP EEMSAIKANI LGTTVLAENL NQATEIAKRG HFRFRVVSLS GQVVNAGGSM
TGGATQKRGA TLLSRQSDIA ELSERADELS VQARTLEETL QLKRSTGEQL QEKLLLAQES
LRAAQNDTKK IDYELSRQQD AIKQQKRAVQ AIEYELKEVS EQQLELKNRI VEFSTKIENI
EQQKLDQEQL TAKLAHDLET ASIKSQSTNE EKATLQTQFA TVGAQLDSIN GQLSLLQNQR
NELQREHSTV EENLKNLQKQ LAIAQGNVAN QSIIDDMSHQ LDATQEKYDN INTQIVALTN
SITDLEEQFA TQQETLRTLI GSQSQSAAHL ARLQTQIENL QTQLLTQYDV GDVEALYQKV
ADMDFQNITE QLRLVKRSLD EIGNVNIGAI EEYESVKTRF EFLTKQRDDL NSAKETLLQT
IDEMDKEVQV RFKKTFDAVA AHFSDIYAKM FGGGRAEISL TDPAHLLTTG IDITAQPPGK
KFQQMSLLSG GEKALTAITL LFAILHVRPV PFVVLDEAEA ALDEANVARF ARYLREFAGD
TQFIVITHRK GTMVNANLLY GVTMQEAGVS KMVSVDLDRM EEAVS