Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LEUM_1546 |
Symbol | |
ID | 4423276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
Kingdom | Bacteria |
Replicon accession | NC_008531 |
Strand | + |
Start bp | 1547324 |
End bp | 1548028 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639675241 |
Product | putative transcription activator |
Protein accession | YP_819011 |
Protein GI | 116618640 |
COG category | [K] Transcription |
COG ID | [COG0819] Putative transcription activator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0260414 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTTCAG AAGAATTGCG CACCCAAGCT GCACCAATTA TGACAGCCAT TCATGATCAC GCATTTGTTC GTGGCATCGC GGACGGTTAC GTCCCCCGAG AAGCTTTGAT TTTTTACGTT GAACAAGATT TCCAATATCT TAGTGAATTT ATCAAAATTT ATGCCAATGC CATTACAAAA TTAACTGATC GTAATGAAAT GAAATTTTTT GCTGATTCAA TTGATTTCAT TTTAAATAGC GAAATTCATC CCCATCATGT TTTTTGTGAC GTTGCCGGCG TCGAATATGA AACATTGCAA CACGCCACGC CAACACCTAA AGCATATCTA TACGAATCAC ATATGTATCG TGCGGCTGAC ACCGGCTCCT TATTAAATAT TCTAGCTGCT TTTCAGGCGT GCCCTTGGAC CTATAATGAA ATTGCAAAAA AACAAGTTCA GGAGAAAGCG AACACAAATG ATAACCCATT CAAAAGCTGG ATTGATTTTT ATGATAATAC AGATGATGAT CCGGAAGTTT CACTATCTGA CAAAATCTTT GAATGGATAG ATCGCTTGGC AGAAAATGCA ACAACTCAAC AACGCCAACA GGCCACACAG TTTTTTCTTA AAAGTTGTGA ATTAGAATGG CAGTTCTGGG AACAAGCCTA CCACCAAGAA GACTGGCGCT TCAAAGATGT ATTAAATCAG GCAAACTCTT TGTAA
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Protein sequence | MFSEELRTQA APIMTAIHDH AFVRGIADGY VPREALIFYV EQDFQYLSEF IKIYANAITK LTDRNEMKFF ADSIDFILNS EIHPHHVFCD VAGVEYETLQ HATPTPKAYL YESHMYRAAD TGSLLNILAA FQACPWTYNE IAKKQVQEKA NTNDNPFKSW IDFYDNTDDD PEVSLSDKIF EWIDRLAENA TTQQRQQATQ FFLKSCELEW QFWEQAYHQE DWRFKDVLNQ ANSL
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