Gene LEUM_1546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLEUM_1546 
Symbol 
ID4423276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeuconostoc mesenteroides subsp. mesenteroides ATCC 8293 
KingdomBacteria 
Replicon accessionNC_008531 
Strand
Start bp1547324 
End bp1548028 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content39% 
IMG OID639675241 
Productputative transcription activator 
Protein accessionYP_819011 
Protein GI116618640 
COG category[K] Transcription 
COG ID[COG0819] Putative transcription activator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0260414 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTCAG AAGAATTGCG CACCCAAGCT GCACCAATTA TGACAGCCAT TCATGATCAC 
GCATTTGTTC GTGGCATCGC GGACGGTTAC GTCCCCCGAG AAGCTTTGAT TTTTTACGTT
GAACAAGATT TCCAATATCT TAGTGAATTT ATCAAAATTT ATGCCAATGC CATTACAAAA
TTAACTGATC GTAATGAAAT GAAATTTTTT GCTGATTCAA TTGATTTCAT TTTAAATAGC
GAAATTCATC CCCATCATGT TTTTTGTGAC GTTGCCGGCG TCGAATATGA AACATTGCAA
CACGCCACGC CAACACCTAA AGCATATCTA TACGAATCAC ATATGTATCG TGCGGCTGAC
ACCGGCTCCT TATTAAATAT TCTAGCTGCT TTTCAGGCGT GCCCTTGGAC CTATAATGAA
ATTGCAAAAA AACAAGTTCA GGAGAAAGCG AACACAAATG ATAACCCATT CAAAAGCTGG
ATTGATTTTT ATGATAATAC AGATGATGAT CCGGAAGTTT CACTATCTGA CAAAATCTTT
GAATGGATAG ATCGCTTGGC AGAAAATGCA ACAACTCAAC AACGCCAACA GGCCACACAG
TTTTTTCTTA AAAGTTGTGA ATTAGAATGG CAGTTCTGGG AACAAGCCTA CCACCAAGAA
GACTGGCGCT TCAAAGATGT ATTAAATCAG GCAAACTCTT TGTAA
 
Protein sequence
MFSEELRTQA APIMTAIHDH AFVRGIADGY VPREALIFYV EQDFQYLSEF IKIYANAITK 
LTDRNEMKFF ADSIDFILNS EIHPHHVFCD VAGVEYETLQ HATPTPKAYL YESHMYRAAD
TGSLLNILAA FQACPWTYNE IAKKQVQEKA NTNDNPFKSW IDFYDNTDDD PEVSLSDKIF
EWIDRLAENA TTQQRQQATQ FFLKSCELEW QFWEQAYHQE DWRFKDVLNQ ANSL