| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LEUM_1474 |
|---|
| Symbol | |
|---|
| ID | 4423204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008531 |
|---|
| Strand | - |
|---|
| Start bp | 1467666 |
|---|
| End bp | 1469633 |
|---|
| Gene Length | 1968 bp |
|---|
| Protein Length | 655 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 639675169 |
|---|
| Product | single-stranded DNA-specific exonuclease |
|---|
| Protein accession | YP_818939 |
|---|
| Protein GI | 116618568 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
|---|
| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAAA ATAATTGGAA CATTCTGCCA CAACCAAGTG AAAAGGTTGT TCGGCAGTTA
AGCGCACAAC TAAATATTAG TCAATTTATG TCAACAATTG TGGCTCAAAG GGGTTATACA
GATCCAGAAG CAGCTTTTAA ATATCTACAA CCAAGTGTAG AACAATTGCA TGATCCCATG
TTACTTCATG ATATGGATAG AACCATTGAG CGTCTACAGG ACGCAGCTTT TGGTGGTGAA
AAGATTGTTG TGTACGGTGA TTATGATATG GATGGTGTCA CTAGTACAGC AATTATGGTT
GAAGCCTTAG AAGTATTGGG GGCAGATGTA ACACCTTACA TACCTAATCG CTTTTCAGAT
GGCTATGGGC CAAATATTGA TACGTATAAA AAACTTATTG CTGATGGTGC GCAATTGATT
GTGACAGTAG ATAACGGTGT TAGTGGTCAA GAAGCTGTTG AATATGCGAT GAGTCAAGGT
ATTGATGTCA TTATTACTGA TCATCACGAA ATGCCTGCCA CATTGCCAAA CGCTTATGCC
GTTATTCACC CAAGACATCC AAAAGGCCAG TATCCATTTG GTGATTTATC TGGCGCTGGT
GTTGCTTTCA AAGTTGCCCA AGCATTATTA AATGAAGGGC AACCAGTTGA GGATCAAACA
GAGCTACCAA CTGAGTTGTT GGATCTCGTT GCGTTAGGTG AAATTTCTGA TATGGTGTCT
TTGACTGACG AAAACAGGGT TCTAGTTTCA TGGGGATTGA AACAAATTAA TGTTTCGCCA
CGTCCGGGTC TAACCGCAGT TTTGAAAAAT GCGGGTAAGA AAGATAATGA ACCAGTTATT
TCAGAAACAG TTTCATTTAA GATTGCCCCT CGCTTAAATG CTGTTGGTCG ATTAGGGGAT
GCTAGCTTAT CTCTACAACT TTTGTTAAGT CAAGATCCAG AAGAATCAAC TGCCATTGCT
TCTGAAGTTG AGGCCATTAA TGCGCAACGT CAAGAAATTG TTGAAGAGGT ATTTGGGTCT
GCAAAACAAA TGGCTTTGTC AGACGAATAC AAAAATGATC AAGTCTTGGT TATTGCTGGT
CAAGATTGGC ATCAAGGAAT TTTGGGTATT GTGGCTAGTC GATTGGTGGA ACTATTACAA
AAACCAACAA TTGTTTTAAG TTTAACGGAT GGTGTTTATA AAGGATCTGG TCGGACTTTT
GGTGATTTTG ACCTCTATCA ATTTATGAAT ACCTTTCACG ATTTGTATGA TACGTTTGGT
GGGCATGCCA GTGCACTAGG ACTAGCTATT TCCCCAGAGC AACTAGATGT ATTAAAAGAG
CAAGTTCGTT TGAACTCAGC TAAATTACAA ATTCATGCCA AGCCGATTAG TATTAATACG
ACACTGTCGG TTAATGAAAT CAGCACTGAA ACGTATGAAG AACTACGCCT GCTTGAACCT
TTCGGTACTG GAAATCAGCA ACCAGTGTTT GGATTGCAGC AACCAAAAAT TAATAAAGTA
ACAACCATGG GAAACTTAAA GCAACATATT AAGTTAGCTT TAGAAAATAA TGTTGAAGCA
GTTGGCTTTA ACCATCCAGA TTGGGTGCCT ATGGTTGCTA ATCCATTAGG GATATCATTT
GCTGCGACTC TGGGTATTAA TTATTTCCGT GGGCGCAAAA CGATACAGCT TCTACTAACT
GCTATTAATA CATCAGAGGC AACTGATGAA AATGCTGCTC ATAAAAAGTT TTTTGCTCAA
GTATATAAAT TCATTTACGC ACATCAGGAT CTAAATTTTG CGCAGAACTT GGATAAAATA
GCGAAGCAGT TAAATATCAA TAAGAACGAT TTGAATATTA TGATTCAAGT ATTTATTGAA
TTAGGATTCG TGCACGTTAC CAATGGATTT GTTACAATTA TTTCGGGAGC AGCACAAAAA
CCCTTAACCA CGTCAATAAC ATACCAAAAG TATTTGGCAA ATCGTTAA
|
|---|
| Protein sequence | MNQNNWNILP QPSEKVVRQL SAQLNISQFM STIVAQRGYT DPEAAFKYLQ PSVEQLHDPM
LLHDMDRTIE RLQDAAFGGE KIVVYGDYDM DGVTSTAIMV EALEVLGADV TPYIPNRFSD
GYGPNIDTYK KLIADGAQLI VTVDNGVSGQ EAVEYAMSQG IDVIITDHHE MPATLPNAYA
VIHPRHPKGQ YPFGDLSGAG VAFKVAQALL NEGQPVEDQT ELPTELLDLV ALGEISDMVS
LTDENRVLVS WGLKQINVSP RPGLTAVLKN AGKKDNEPVI SETVSFKIAP RLNAVGRLGD
ASLSLQLLLS QDPEESTAIA SEVEAINAQR QEIVEEVFGS AKQMALSDEY KNDQVLVIAG
QDWHQGILGI VASRLVELLQ KPTIVLSLTD GVYKGSGRTF GDFDLYQFMN TFHDLYDTFG
GHASALGLAI SPEQLDVLKE QVRLNSAKLQ IHAKPISINT TLSVNEISTE TYEELRLLEP
FGTGNQQPVF GLQQPKINKV TTMGNLKQHI KLALENNVEA VGFNHPDWVP MVANPLGISF
AATLGINYFR GRKTIQLLLT AINTSEATDE NAAHKKFFAQ VYKFIYAHQD LNFAQNLDKI
AKQLNINKND LNIMIQVFIE LGFVHVTNGF VTIISGAAQK PLTTSITYQK YLANR
|
|---|
| |