Gene LEUM_1388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLEUM_1388 
Symbol 
ID4423171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeuconostoc mesenteroides subsp. mesenteroides ATCC 8293 
KingdomBacteria 
Replicon accessionNC_008531 
Strand
Start bp1373858 
End bp1374910 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content40% 
IMG OID639675083 
Productisopentenyl pyrophosphate isomerase 
Protein accessionYP_818854 
Protein GI116618483 
COG category[C] Energy production and conversion 
COG ID[COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases 
TIGRFAM ID[TIGR02151] isopentenyl-diphosphate delta-isomerase, type 2 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAT CTGCTCAATC TCATCGTAAA GATGAACATC TATCGCTTGG TGTCAAACTC 
TGGCGTCAAA ATACAATGCC TGTCATTGGT GCAACTTATG ATGATGTACG TTGGTTACCC
AATACTTTTC CCGAAACGAG TGTGTCAGAA GTTGATGTTT CAACCAAATT ATTTGAACAC
CACTTTAAAT GGCCCTTCTA CATTGAAGCC ATGACAGGCG GATCAGCTTT AACTGGTCGC
ATCAATATGG AACTTGCTGA GGTAGCTGCT GAGTCAAATA TTGCTATGGC AGTTGGCTCA
CAATCGATTG CACTTAAAGA ACCAGAAACT CGTGATACAT TCACAATTGT TCGTAAGAAG
AATCCCAATG GTTTTCTATT TGCCAATTTA GGGGCCGACC ATCCTATTTC AAATGTACGT
ACTGCCATTG ATATGATTGA TGCTAATGCC ATTGAACTTC ATGTTAATGC CGCCCAAGAA
CTTGTCATGG CTGAAGGTGA TCGCAAATTC TATTGGCTAG ACAATCTTGC TGAAATCATC
GCAAAGTCAC CTGTTCCGGT GATAATTAAG GAAGTCGGCT TTGGTATGAG TCAGTCTACT
TTCAAACAAA TTGCCGATCT AAATCCAGCT GCTATCAATG TTGGTGGAGC AAACGGAACA
AATTTTTCTA TTATTGAACA AAGGCGTAAT CGCCTTTCTG AAGCTGTTAA TTTAGATCAT
TACGGACTAT CAACTGTCGA AAGTTTGCTG GAAGCAAAAA TGGCTAAAAA TAACTTACCC
TTAATTGCTA CAGGAGGCAT TCAAAGTGTG AATCATGTCA TAACTAGTCT CATGCTGGGC
GCGTCTTTAA CTTCTAGTGC TGGTTTCATG CTCACAACAC TAATGGAAAA AGGTCAAAAA
TCATTACTCG AAGAAATTAA TGCATGGCAA GTAGCGTTGC CACGTCTATT CACATTACTT
GGTGCCCAAA ATATCACGGA ACTGCAACAT AAACCACTAA TATACAGCCC TAACCTACAA
AATTTTATTG CACAACAAAA AGCATCTCAA TGA
 
Protein sequence
MTESAQSHRK DEHLSLGVKL WRQNTMPVIG ATYDDVRWLP NTFPETSVSE VDVSTKLFEH 
HFKWPFYIEA MTGGSALTGR INMELAEVAA ESNIAMAVGS QSIALKEPET RDTFTIVRKK
NPNGFLFANL GADHPISNVR TAIDMIDANA IELHVNAAQE LVMAEGDRKF YWLDNLAEII
AKSPVPVIIK EVGFGMSQST FKQIADLNPA AINVGGANGT NFSIIEQRRN RLSEAVNLDH
YGLSTVESLL EAKMAKNNLP LIATGGIQSV NHVITSLMLG ASLTSSAGFM LTTLMEKGQK
SLLEEINAWQ VALPRLFTLL GAQNITELQH KPLIYSPNLQ NFIAQQKASQ