| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LEUM_1386 |
|---|
| Symbol | |
|---|
| ID | 4423169 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008531 |
|---|
| Strand | + |
|---|
| Start bp | 1371903 |
|---|
| End bp | 1372844 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639675081 |
|---|
| Product | diphosphomevalonate decarboxylase |
|---|
| Protein accession | YP_818852 |
|---|
| Protein GI | 116618481 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3407] Mevalonate pyrophosphate decarboxylase |
|---|
| TIGRFAM ID | [TIGR01240] diphosphomevalonate decarboxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCTA CTGCCCATAC AAATATTGCC CTCATAAAAT ACTGGGGAAA AAAAAATACG
GAACTGAATC TACCGACAAC TAGCTCACTT TCATTAACAC TAGACAAGTT TTACACAACA
ACTTCTGTGG AACCTGCCAA TCATGATCGT TTTATTTTAA ATGACCAAGT CGTCGACGCC
ACTCGTGTTC ATCGCTTTTT GGATATTCTG CGACAACAGT TGGGTGATTT TACACCACTG
CAGGTTATTT CTGAAAATCA TGTACCTACA AGTGCTGGAT TAGCCTCCTC TGCTTCGGCT
TTTGCTGCGT TAACAGGAGC TGTTACACAC GAATTAGGAA TGGACCTACC CAAGGAAGAA
TTATCCCGCT TAGCCCGTCG TGGTTCTGGT TCAGCTAGTC GCTCTTTTTT TGGTAACTTC
GCCATGTGGC ATAAAGGTAT TGACGACGCA TCTTCTTTTG CCGAGAGCCT TAACGCGCCT
GAATTGCCCA TTGCCTTGGT TGTTGCTGAG GTTTGTGATG CGCCTAAAAA GATAACTTCA
ACTGAGGGAA TGAAACGTGC TATTACCTCA CCAAATTATG ATCGCTGGCT ATCAAAGTCG
GCTAATCAAT TCATTGATAT GCAACATGCT ATCCTAGATC AAGATATTGA CAAAATTGGT
GCTTTGGCTG AAGATAATGC CTTGGGTATG CATGCTTTAA ATTTAACAGC TACAAGAAGC
CCATTCACTT ATTTTACAGA CAAAACACAA TTAATTTTAT CTTTGATACA AGATATGCGC
CATCAAGGAA TATTGGCCTA TGCAACAATT GATGCAGGGC CAAACGTTAA AATTATCACA
ACAACGCAAG AAGCGCCCAA AATTGTGACC ATACTAAATC ATGCCATACC ATCCCTGAAA
CTTGAAATTG CTCAAAGCGG GCCTGGAATT TCTTATGACT AA
|
|---|
| Protein sequence | MKATAHTNIA LIKYWGKKNT ELNLPTTSSL SLTLDKFYTT TSVEPANHDR FILNDQVVDA
TRVHRFLDIL RQQLGDFTPL QVISENHVPT SAGLASSASA FAALTGAVTH ELGMDLPKEE
LSRLARRGSG SASRSFFGNF AMWHKGIDDA SSFAESLNAP ELPIALVVAE VCDAPKKITS
TEGMKRAITS PNYDRWLSKS ANQFIDMQHA ILDQDIDKIG ALAEDNALGM HALNLTATRS
PFTYFTDKTQ LILSLIQDMR HQGILAYATI DAGPNVKIIT TTQEAPKIVT ILNHAIPSLK
LEIAQSGPGI SYD
|
|---|
| |