Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LEUM_1300 |
Symbol | |
ID | 4423048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
Kingdom | Bacteria |
Replicon accession | NC_008531 |
Strand | - |
Start bp | 1287299 |
End bp | 1288192 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639674996 |
Product | tyrosine recombinase XerD subunit |
Protein accession | YP_818770 |
Protein GI | 116618399 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGAAA TTGACAATGC GATAGTGGAT TATCTACACT ATATTCGAAT TGAACGTGGC TTATCTGAAA ATACAATTAA GAGTTACCAC CAAGATTTGG TACAATTTGG TGAGTATCTA AATGGTGAGA AACTGGTGCT TGATCAAGTT GATCATATTG TTATCTTGTC GTGGTTGAAT AAACTCAGAG ATCTAGGAAA ATCCAATAGT TCAGTGATTA GAATGGTTAC GACATTGCGT AACTTTTTTG GCTATTTAGT GCGAGAAAAA GTCGTCGCTC ATAATCCAAT GAATGATGTT CGCCCACCCA AAAAAGCAGA GCACCTACCA GCAGTTTTGA GCATAGAGGA AATTGACCGT TTATTACAAG CACCGATAGA AGATACACCA CTTGGTCTTC GAAATAGAAC ATTGCTAGAA GTGATGTACG CAACTGGTTT GCGTGTCAGT GAATTGGTTA ATTTAAAAAT GAGTGACCTT CATTTGCAAT TGGGACTGAT TCAAACACTC GGAAAAGGTG ACAAAGAACG TATTATTCCA ATTGGTGAAA TTGCGATTGA TTGGCTGACT CGATATTTTA ATGAAAGCCG TATCGTTTTA CTTAAAGACA AAGAGTCTCC TTATGTTTTC TTAAACGATC GTGGAAATCA AATTTCACGA CAGGGAATAT GGAAGATTAT AAAAAAGTTG GTAACAACTG CTGGAATAAC TAAAGATGTT TCTCCCCATA CACTTCGTCA TTCTTTTGCT ACCCATATTT TAGAGAACGG TGCTGATTTG CGTATAGTTC AAGAATTATT GGGGCATGCG GACATTTCGA CAACACAAAT TTATACCCAT ATTTCGAAAA AAAGACTTAG TGAAGTGTAT GATGAATACC ACCCCAGAGC GTAA
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Protein sequence | MQEIDNAIVD YLHYIRIERG LSENTIKSYH QDLVQFGEYL NGEKLVLDQV DHIVILSWLN KLRDLGKSNS SVIRMVTTLR NFFGYLVREK VVAHNPMNDV RPPKKAEHLP AVLSIEEIDR LLQAPIEDTP LGLRNRTLLE VMYATGLRVS ELVNLKMSDL HLQLGLIQTL GKGDKERIIP IGEIAIDWLT RYFNESRIVL LKDKESPYVF LNDRGNQISR QGIWKIIKKL VTTAGITKDV SPHTLRHSFA THILENGADL RIVQELLGHA DISTTQIYTH ISKKRLSEVY DEYHPRA
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