Gene LEUM_1288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLEUM_1288 
Symbol 
ID4423036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeuconostoc mesenteroides subsp. mesenteroides ATCC 8293 
KingdomBacteria 
Replicon accessionNC_008531 
Strand+ 
Start bp1277641 
End bp1278780 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content39% 
IMG OID639674984 
Productcystathionine gamma-lyase 
Protein accessionYP_818758 
Protein GI116618387 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.076956 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTG ATACACAACT TATTCATGGT GGCATTAGTG TTGACCAATC AACTGGCGCC 
GTATCTGTCC CTATTCATAT GGCTTCAACC TTTAAGCAAA CTAAAATTGG CGAGGCAAAA 
TATGAATATT CAAGATCTGG CAACCCAACC CGTGAAGCCG TAGAAAGCTT AATTGCAGAC 
TTAGAAAATG GTACTGCTGG CTTTGCTTTT GCATCAGGAT CTGCGGCGAT AAGTACTATT 
TTTTCACTAT TTTCATCTGG GGATCACATT ATTGTTGGAA ACGATGTTTA TGGTGGTACA 
TTTAGGCTAA TTGACAATGT CCTAAAAAGA ACAGGTCAGA CATTTACAAT TGTCGATACC 
CGTGATTTAT CTGCTATTCA GGAAGCTATT CAAGATAATA CTGTCGCCAT TTACCTTGAA 
ACACCAACTA ATCCTCTATT ACGCATTAGT GATATCAAGG CAATTTCCGA ACTTGCTCAT 
CGTCATAATT TATTAAGTAT TGTTGACAAC ACATTTGCTT CTCCTTATGT ACAAAAGCCA 
ATTGACCTAG GTGTGGACAT TGTTGTTCAC AGCGCTTCAA AGTACTTAGG TGGTCATAGC 
GACCTCATTG CCGGCTTAGT TGTTACTAAA GGTGAGAAAC TTAGTGAGAA AATTAAGTTC 
TTACAAAATG CGATTGGTGC AATCTTGGCC CCTCAGGAAA GTTGGCTCCT ACAACGAGGT 
ATGAAAACGC TTGGATTAAG AATGCGTGCT CACCAGTCAA ATGCGCAAAC AATATTTGAT 
TACCTTAAAA CACAAGATAA AGTTGGTAAA ATATATTTCC CTGGTGATCC TGATAATCCT 
GACCATGCTT TAGCCAAGCA ACAGATGAAT GGTTTTGGTG CCATGATTTC ATTTGAGCTA 
AAGGCTGGGC TGGATCCAGA ACAATTCATT AGTAACTTAA AAATCGTTAC CTTAGCAGAG 
AGTTTAGGTG CACTTGAAAG CCTAATTGAA ATTCCAGCTA AAATGACTCA CGGCGCCATT 
CCTCGTAATA TCCGGCTATC TCATGGCATT CAAGACGAAC TAATCCGTCT CTCTGTGGGT 
GTTGAAGATA TTGAAGATTT AATTGAGGAC CTAGAACAAG GTTTTAATCA ATTGAAATAA
 
Protein sequence
MKFDTQLIHG GISVDQSTGA VSVPIHMAST FKQTKIGEAK YEYSRSGNPT REAVESLIAD 
LENGTAGFAF ASGSAAISTI FSLFSSGDHI IVGNDVYGGT FRLIDNVLKR TGQTFTIVDT 
RDLSAIQEAI QDNTVAIYLE TPTNPLLRIS DIKAISELAH RHNLLSIVDN TFASPYVQKP 
IDLGVDIVVH SASKYLGGHS DLIAGLVVTK GEKLSEKIKF LQNAIGAILA PQESWLLQRG 
MKTLGLRMRA HQSNAQTIFD YLKTQDKVGK IYFPGDPDNP DHALAKQQMN GFGAMISFEL 
KAGLDPEQFI SNLKIVTLAE SLGALESLIE IPAKMTHGAI PRNIRLSHGI QDELIRLSVG 
VEDIEDLIED LEQGFNQLK