Gene LEUM_1241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLEUM_1241 
Symbol 
ID4423842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeuconostoc mesenteroides subsp. mesenteroides ATCC 8293 
KingdomBacteria 
Replicon accessionNC_008531 
Strand
Start bp1235069 
End bp1236367 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content41% 
IMG OID639674938 
ProductDNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 
Protein accessionYP_818712 
Protein GI116618341 
COG category[K] Transcription 
COG ID[COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 
TIGRFAM ID[TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00483871 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAATTA TTTCAAGTTC AAGTAAAATT TCAGATATTA AAGATTATCT TGATGAGCAA 
AAAATTGCTT ATAATAGTCG AGCAAAGAAG GCTGAACTAT TAGCTTTGGC ACAAGGAAAG
ACTCCTGAAC AAGCGGCAGC AGCTGGAAAA GCTTCAAAGC CAAAATCAGC CAAAAAGTCT
GGTCCACTAA AAAATCCTGA GTACGACAAG GCAACCAAAG CGTTAATTGC TGAGTATAAA
GCAGCAAAAC AAATAACATA TGCAGCACTT TCAAAGCGTT TAGCTGAGCC CTTTAACTTA
GATGAAGAAA ACATCGAACG TCTGATGGAA AAAGTTGAAG ATGCCGGTAT AGCAATTGTT
GATGACAATG GTGATCCAGC GCCAGAAGTG TTAAAGGCCA AGCAGAACAA ACCCACTGAT
CAAGAGTTAG CAGAAGCCGA GGAAACCCCA GCTGGTATTA AAATTAACGA TCCAGTGCGT
ATGTACCTCA AAGAAATTGG CCGTGTCAAT TTGTTGAAGG GAAATGAAGA AATTGATATC
GCTAAGCGTA TTGAAAATGG GGACGTCGAA GCCAAGCAAG AGTTAGCAGA AGCCAACTTG
CGGTTGGTTG TCTCGATTGC CAAGCGTTAC GTTGGTCGTG GTATGCAATT CTTGGATTTA
ATCCAAGAAG GAAATATGGG CTTAATGAAA GCCGTAGATA AGTTCGATTA TACCAAAGGA
TTTAAGTTCT CAACGTATGC TACATGGTGG ATTCGTCAGG CTATTACACG TGCTATCGCC
GATCAAGCGC GTACGATTCG TATTCCAGTC CACATGGTTG AAACGATTAA TAAGCTGATT
CGTATACAGC GTCAATTGTT ACAAGATTTG GGACGTGAAC CTCTTCCGGA AGAAATCGGT
GCTGAAATGG ATTTGACGGC CGACAAAGTA CGTGAAATCT TAAAAATTGC TCAAGAACCA
GTATCTCTTG AAACACCTAT TGGTGAAGAA GATGATTCTC ATTTGGGTGA TTTCATCGAA
GATAATGAGG CAGTTTCTCC AGCTGATTCT GCAGCATATG AAATGCTCAG GGAACAATTG
GAATCTGTTT TGGATACATT GACTGATCGA GAAGAAAATG TCTTGCGTTT GCGCTTCGGA
TTAGAAGACG GACGTACACG TACATTGGAA GAAGTTGGCC GTGTATTTGG TGTAACACGT
GAACGTATTC GTCAAATTGA AGCGAAAGCG TTACGAAAGT TACGTCATCC AAGTCGTTCA
AAACAATTGA AGGATTTCAT GGATGAGAGT ACGAATTAA
 
Protein sequence
MTIISSSSKI SDIKDYLDEQ KIAYNSRAKK AELLALAQGK TPEQAAAAGK ASKPKSAKKS 
GPLKNPEYDK ATKALIAEYK AAKQITYAAL SKRLAEPFNL DEENIERLME KVEDAGIAIV
DDNGDPAPEV LKAKQNKPTD QELAEAEETP AGIKINDPVR MYLKEIGRVN LLKGNEEIDI
AKRIENGDVE AKQELAEANL RLVVSIAKRY VGRGMQFLDL IQEGNMGLMK AVDKFDYTKG
FKFSTYATWW IRQAITRAIA DQARTIRIPV HMVETINKLI RIQRQLLQDL GREPLPEEIG
AEMDLTADKV REILKIAQEP VSLETPIGEE DDSHLGDFIE DNEAVSPADS AAYEMLREQL
ESVLDTLTDR EENVLRLRFG LEDGRTRTLE EVGRVFGVTR ERIRQIEAKA LRKLRHPSRS
KQLKDFMDES TN