Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LEUM_1236 |
Symbol | |
ID | 4423001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
Kingdom | Bacteria |
Replicon accession | NC_008531 |
Strand | - |
Start bp | 1230162 |
End bp | 1230998 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639674933 |
Product | ABC-type amino acid transport system, periplasmic component |
Protein accession | YP_818707 |
Protein GI | 116618336 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAGCTC CACGTCAAAA AAAGTCACAC AATAATATTG TGTATATTGT CTTAGGTGTC GTTATTGTAG GGATTGTCAT AGGCACAACA AAATTGGTGG GACATTCAGC AACCACCAAA AGTAAATCAG AAAAGAAAAT ATCAGTATTA ACGTATGCTA ACTGGAACCC GTTTGAATAC ATAAAAAATG GTAAGGTTGT TGGGTTTGAT TTAGATATCT TAAAATCTTT GTCTAAAGAA GCGGGCTATC AGTATACGAT TAAGAATACT GGTTGGGACT CGATGTTTAC ACAATTAAAT TCTGGTTCAG CTGATGCAGC TATTTCTGGT ATTACAATTA CAAAAGATCG TCAAAAAACA TATTCGTTTT CAAAGCCTTA CTTTGTTTCT CGACAGGCAA TCATTGTTAA GAAAACTGAC ACAGTAATTA AAAATGCAAC TGATCTGAAG AATAAAAAAG TTGCTGTTCA GCTAGGTTCA ACCGGAGAGG AAGCTGCTGA ATCAATCCTT GGCAAGAATA GTTCAAATAT TAGCAAAGAC AAAGGCGGCA CAACATTTTT ACAGGTTGTT CATGGGCAAG CAGACGCTGC AATTGGTGAC GAAACCACTG TTAAAAAGTA TGTGGCAAGT AATCCCTCAT ACAAATTAAA AGTTATTTAT GACGATAAAA ACTTTGAACC AGAATATTTT GGTTTGATGT TTACTAAAAA TTCAAAATAC CGTTCAACAT ATAACGCTGC TTTGAAAAAA ATAATTGACA ATGGCGAATA TACAAAAATT TATGAAAAGT GGTTTGGTAG TAAGCCATCA CTTGATGTCA TAAAGTCACA GCAATGA
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Protein sequence | MVAPRQKKSH NNIVYIVLGV VIVGIVIGTT KLVGHSATTK SKSEKKISVL TYANWNPFEY IKNGKVVGFD LDILKSLSKE AGYQYTIKNT GWDSMFTQLN SGSADAAISG ITITKDRQKT YSFSKPYFVS RQAIIVKKTD TVIKNATDLK NKKVAVQLGS TGEEAAESIL GKNSSNISKD KGGTTFLQVV HGQADAAIGD ETTVKKYVAS NPSYKLKVIY DDKNFEPEYF GLMFTKNSKY RSTYNAALKK IIDNGEYTKI YEKWFGSKPS LDVIKSQQ
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