| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LEUM_1168 |
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| Symbol | |
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| ID | 4422930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008531 |
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| Strand | - |
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| Start bp | 1164413 |
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| End bp | 1165237 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 639674865 |
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| Product | shikimate dehydrogenase |
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| Protein accession | YP_818639 |
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| Protein GI | 116618268 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00990538 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTTAT ATGGATTAAT CGCGCATCCG GCCGGACATT CACGTTCGCC GCAAATGCAA
AACATGATGA TAGCTGAATA TGGTATTGAT GCACACTATC ACGCTTTCAA CATTTTACCA
GAAAAACTTG AAGAGGCCAT CGTTGGATTA AAAGCCCTAC ACGTAGGCGG ATTCAATGTT
TCAACACCGT TTAAAAATGA AATTATTCAA TATTTGGATG AGCTATCGCC AATATCTCAG
CGGCTTCATG CGGTGAATAC GGTTAAAAGT GTTAAAGGGC ATCTGATTGG CACTAACACA
GATGGAGACG GGTTCTGGCA AAGTATTAAT TCTCGCCAAC CCAAAGAAAT GGTTATTGTA
CTGGGTACTG GCGGAGCAGC TAGATCAGTG ATTGCCACTG CGAAACTGTA TGGCGTGAGG
GAATTAATTG TGTTTAATAG AGTTCATGAA GATTGGCATG AGCGAAAAGC AGAGATTAGC
TATCTTAGTG AGGGGAATGG GCATCTAGAG GATTTAGCAG ATAATCAGAT GCTCACCAAA
GCATTAAAGC GTGCTGATAT GCTTATCAAT GCCACCACCG TTGGGATGAA TGATTTGCGG
ACGCTATTAA CGGATTTGCA AATAGCATTA CTACCACAGC ACGCCTTGGT GGTGGACATG
ATTTATCGTA ATCAACAAAC TACATTATTG AAATCTGCTA ACCAACGTGG ATTAGCAACA
TTAAATGGTT TGCCGATGTT AGTCAATCAA GGAGCGCTAA GCTTTGAATA TTGGTTCGAC
AGGCCAGCTG ACAGAAATCT TATGAAGAAA GCAATTGAGG AATAA
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| Protein sequence | MTLYGLIAHP AGHSRSPQMQ NMMIAEYGID AHYHAFNILP EKLEEAIVGL KALHVGGFNV
STPFKNEIIQ YLDELSPISQ RLHAVNTVKS VKGHLIGTNT DGDGFWQSIN SRQPKEMVIV
LGTGGAARSV IATAKLYGVR ELIVFNRVHE DWHERKAEIS YLSEGNGHLE DLADNQMLTK
ALKRADMLIN ATTVGMNDLR TLLTDLQIAL LPQHALVVDM IYRNQQTTLL KSANQRGLAT
LNGLPMLVNQ GALSFEYWFD RPADRNLMKK AIEE
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