| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LEUM_1167 |
|---|
| Symbol | |
|---|
| ID | 4422929 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008531 |
|---|
| Strand | - |
|---|
| Start bp | 1163416 |
|---|
| End bp | 1164408 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639674864 |
|---|
| Product | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase |
|---|
| Protein accession | YP_818638 |
|---|
| Protein GI | 116618267 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2876] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
|---|
| TIGRFAM ID | [TIGR01361] phospho-2-dehydro-3-deoxyheptonate aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTATTA TCGCAAAGAC AAGTCAAGAT GCAGAAAAAA TTGCAGCGCA ATTAGATACC
AAAGACCCTA TTAAACCAGT GTTTGTTCAC AGTAATAGAG TTGCGTTAGC CGGCGTGAAA
AAGTTACCCG AAGATATATT GAAAAATATA TCACAAGACG TTGTTGAAAT AATCACAAAC
CATCATTCAG CCATCAAGTC ATCACGTGAC TTCCACCCAG AGGATACAAT TATTACAACT
AAACATAGTG TCATCGGTGG TGGTAACTTC GTCTTCATGG CTGGCCCTGA TTCAATCGAA
TCTCCCGAAC ATGTTAAAGA AATGGGTGAA GATGTTAAGC AGGCGGGCGC AACTATCTTG
CGCGGCGGGG CTTTCAAGCC ACGTACATCT CCATATTCAT TTCAAGGTAA TGGCGAAGAA
GGTTTAAAAG CCCATCGCGC AGCAGCAGAT GCGTTGGGAA TGGATATGGT AACCGAAATC
TTAGATACAC GAGATGTGGA TTTAGTTGAT TCTTACACAG ATATTTTCCA AGTCGGTACG
CGTAATATGC AAAACTTTGC TTTGCTTAAG GCCCTGGGAA AGAAGAACAA GCCCGTAGTT
TTGAAACGTG GTATGTCAGC AACCATCGAT GATTTGCTTA ATGCTGCTGA ATACATTGCT
GCTGGTGGGA ATGATCAGAT TATTTTGATG GAACGTGGTA TTCGTACTTA TGATAATAAG
TACACGCGTA ATACGCTTGA TGTATCAGCC ATTCCTGTTT TACAATCGCT AACTCACTAT
CCTGTTGTTG CGGATGCTTC ACATGCGGCT GGTGTTTCAA AGTTTGTTGA ACCGCTTGCT
TTAGCTGCAA TTGCTGCTGG TGCACAAGGT TTGATGACCG AAATACATGA TGATCCGTCA
CATGCATTTG TTGATGGTGC CCAAGCATTG ACACCAGCAC AATTCAAACA ATTGACAGAG
AAGGCAAACA AGGTGCGCGA GGCCATTAAA TGA
|
|---|
| Protein sequence | MIIIAKTSQD AEKIAAQLDT KDPIKPVFVH SNRVALAGVK KLPEDILKNI SQDVVEIITN
HHSAIKSSRD FHPEDTIITT KHSVIGGGNF VFMAGPDSIE SPEHVKEMGE DVKQAGATIL
RGGAFKPRTS PYSFQGNGEE GLKAHRAAAD ALGMDMVTEI LDTRDVDLVD SYTDIFQVGT
RNMQNFALLK ALGKKNKPVV LKRGMSATID DLLNAAEYIA AGGNDQIILM ERGIRTYDNK
YTRNTLDVSA IPVLQSLTHY PVVADASHAA GVSKFVEPLA LAAIAAGAQG LMTEIHDDPS
HAFVDGAQAL TPAQFKQLTE KANKVREAIK
|
|---|
| |