| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LEUM_1005 |
|---|
| Symbol | |
|---|
| ID | 4422784 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008531 |
|---|
| Strand | + |
|---|
| Start bp | 1004401 |
|---|
| End bp | 1006029 |
|---|
| Gene Length | 1629 bp |
|---|
| Protein Length | 542 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 639674705 |
|---|
| Product | malate dehydrogenase |
|---|
| Protein accession | YP_818479 |
|---|
| Protein GI | 116618108 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0281] Malic enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTACAA CAGGGTATAG CATTTTGCGT AATCCATTTT TAAATAAGGG AACGGCATTT
TCTGCAGCTG AGCGTGAGCA ATTGGGCTTA ACTGGCACAT TACCAAGTCA AGTACAAATG
ATTGAAGAAC AAGCAGAACA AGCTTACAAA CAATTTCAGG CGAAAAGTCC TTTACTTGAA
AAAAGAACAT TTCTTATGAA TTTGTTTAAT GAAAACGTGA CATTGTTCTA TCACTTGATG
GATCAACATG TTTCAGAATT TATGCCAATT GTTTATGATC CTATTGTTGC AGAGTCTATT
GAACAATATA ATGAAATTTA CACTAATCCT CAAAATGCAG CATTTTTGTC AATCGATCAT
CCAGAAAATA TTGAGAGCTC ATTGAAGAGT GTCGCTGATG GCAGAGATAT AAAGCTAGTT
GTTGTGACTG ATGCTGAAGG TATATTAGGC ATGGGCGATT GGGGTGTCAA TGGTGTTGAT
ATTGCCGTTG GTAAATTGAT GGTTTACACA GCAGCAGCTG GAATAGACCC GGCAACAGTA
TTACCAGTAA GCATTGATGC AGGTACGAAT AACAAAATAT TATTAGAAAA TCCTTTGTAT
TTAGGGAACA AACATGAACG TATTGCTGGT GAAAAGTATC TTGAATTCAT AGATAAGTTT
GTAACTGCTG AACAAAAATT GTTCCCAGCA TCATTATTGC ATTGGGAAGA TTTTGGACGT
TCAAATGCAC AAGTAATTTT GGATAAATAT AAAGACAGCA TTGCCACATT TAACGATGAT
ATTCAAGGAA CCGGAATGAT TGTTTTGGCA GGAATATTCG GAGCTCTAAA TATATCGAAA
GAAAAACTAG TTGATCAAAG ATTCCTAACG TTCGGTGCCG GTACAGCTGG TATGGGTATT
GTTAATCAGA TTTTTTCAGA ATTAAAACAA GCTGGGTTAT CCGATGCAGA GGCTCGCAGC
CATTTCTATC TTGTGGATAA GCAAGGATTA TTATTTGATG ATACTGAAGA TTTAACTGAA
GCGCAAAAGG CGTTCACACG TTCAAGAAAG GAACTTGTTA ACTCTGAACA ATTAGACAAT
TTGGAAGCAG TGGTCAATGA GATACGTCCA ACAGTTTTGA TTGGTACTTC AACACAGCCA
GGTACATTTA CGGAAGCAAT TGTAAAATCG ATGGCACAAA ATACAGAACG CCCAATTATT
TTTCCTTTGT CAAATCCAAC AAAATTAGCT GAAGCAACTG CAGAAAACTT AATTAAATGG
ACTGATGGAA AAGCTTTGAT AGCAACTGGT ATTCCTGCAG CGAATGTTAC CTACAAAGGA
GTGACATATA AAATAGGACA GGGCAATAAC GCGTTGATTT ATCCTGGTTT AGGCTTTGGT
CTTGTTGCCT CAACTGCTAA GCTGTTAACA CAAGAAACAA TCTCAGCTGC TATTCATGCA
TTGGGTGGTC TAGTGGATGC TGATGAACCA GGAGCAGCAG TACTGCCACC AGTTTCAAAT
CTTACTGAGT TTTCACAAAA GATTGCTGAA ATTACAGCAC AAAGTGTTCT AAAGCAGGGA
CTTAATCGTG AAAAAATTGC CGATCCAAAG CAAGCCGTAC AAGATGCTAA ATGGTCTGCG
GAGTACTAA
|
|---|
| Protein sequence | MTTTGYSILR NPFLNKGTAF SAAEREQLGL TGTLPSQVQM IEEQAEQAYK QFQAKSPLLE
KRTFLMNLFN ENVTLFYHLM DQHVSEFMPI VYDPIVAESI EQYNEIYTNP QNAAFLSIDH
PENIESSLKS VADGRDIKLV VVTDAEGILG MGDWGVNGVD IAVGKLMVYT AAAGIDPATV
LPVSIDAGTN NKILLENPLY LGNKHERIAG EKYLEFIDKF VTAEQKLFPA SLLHWEDFGR
SNAQVILDKY KDSIATFNDD IQGTGMIVLA GIFGALNISK EKLVDQRFLT FGAGTAGMGI
VNQIFSELKQ AGLSDAEARS HFYLVDKQGL LFDDTEDLTE AQKAFTRSRK ELVNSEQLDN
LEAVVNEIRP TVLIGTSTQP GTFTEAIVKS MAQNTERPII FPLSNPTKLA EATAENLIKW
TDGKALIATG IPAANVTYKG VTYKIGQGNN ALIYPGLGFG LVASTAKLLT QETISAAIHA
LGGLVDADEP GAAVLPPVSN LTEFSQKIAE ITAQSVLKQG LNREKIADPK QAVQDAKWSA
EY
|
|---|
| |