| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LEUM_0899 |
|---|
| Symbol | |
|---|
| ID | 4422696 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008531 |
|---|
| Strand | + |
|---|
| Start bp | 899809 |
|---|
| End bp | 901491 |
|---|
| Gene Length | 1683 bp |
|---|
| Protein Length | 560 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639674605 |
|---|
| Product | trehalose-6-phosphate hydrolase |
|---|
| Protein accession | YP_818379 |
|---|
| Protein GI | 116618008 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0366] Glycosidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAAG ATATTAAGTG GTGGCAAAAA GCAGTTGCTT ATCAGGTTTA CCCACGATCG
TTTCAAGATG CAAATGGAGA TGGTATTGGT GATCTTCAAG GCATAGAACA AAGATTAGAT
TATATTAAAA AATTGGGTGC CGATGTCATT TGGTTAAATC CAATATATGC TTCACCTGAC
AAAGATAATG GCTACGATAT CTCTGATTAT GAAGATATTA ATGCAAAATT TGGTACAATG
CAGGACTTTG ATCGATTACT TCAGAAAGCT CATGATAAAG GGATCAAAAT TTTGATGGAC
TTGGTCGTTA ATCACACATC AGACCAACAC CAATGGTTCA TTGAAAGCCG TTCCTCAAAG
GATAATGATA AGCGTGACTT TTATATTTGG CGTGATCCAG TTGATGGACA TGAGCCCAAT
AATTGGGGTT CCTTCTTTTC AGGGCCGGCA TGGAAATTTG ACGAAGAAAC TGGGCAGTAT
TACTTACATT TGTTTGTTGA AGGACAGCCC GATTTGAATT GGGTAAATCC GGAAGTGCGC
CAGGCAGTAT TTGACATGAT GAACTTTTGG GTTGATAAGG GAATTGATGG CTTCCGAATG
GATGTTATTT CTTTGATATC AAAACCAGAT GGGTTACCAG ACGGTGAGGT ACCTGAAGGA
GGGGAGTATG GTAATTCAGA TAAGGCAGTA GCTAATGGGC CCCATGTTCA CGAGTATCTG
CAAGAAATGC GTGAAAAAGT GCTAAAGAGA GCTGATATGA TGACTGTTGG TGAAGCATCT
GGTGTTGATA TCAATAACGC TATCAAGTAT GCAAACACAA ATGAATCAGA ATTAAATATG
GTTTTCCAGT TTGAACATAT GGGACTTGAT AATAATCCAA ATCCAGCTTT GGGAAAATGG
TATGATCAAA AAGTTTCTCT AGTCGACCTG AAGGAAAACT TATCCAAGTG GCAAAATGAT
TTAGCTGGTA AAGCTTGGAA TTCACTTTAT TGGGATAACC ATGATCAACC AAGAGCAGTA
AGCCGCTATG GGGATGACCG AGCAGCGTAT CGTGTGGTTT CAGCAAAGAT GGTTGCGACC
TTATTACACT TTATGCAAGG GACACCATAT GTCTATCAGG GTGAAGAAAT TGGAATGACC
AATGCCTATA ATTTGCAACG TGAAGATTTC GATGATGTTG AAATCAAAAA TGCTTTTAAG
TATTTAATTG ACAAGGATCA TTTGATTGAC GAAGACACAA TGTTGAAATA CGTACATGCG
AAAGGACGCG ACAATGCACG AACGCCGATG CAATGGGACA GTACAGCGAA TGCAGGATTT
ACAACAGGCA CACCATGGCT CAAATTAAAC GATAATTATG ACACAATAAA CGTTGAGCAA
GCACTAGCTG ACAAGAGTTC TATATTTTAC TATTATCAAA AACTAATTCA ATTGCGCCAT
GATTTGCCAA TTATCACTAC TGGCAAGTAT CAGTTGTTGG ATCCGAAAGA CGAGCAAGTC
TATGCGTATC GACGTGTGGG AAACAACGAA CAACTGCTTG TTATCAATAA CTTCACTGAC
AATATCGTTA CACGAGATTA TAGTGTACCA ACAAATGCAA AAATTTTGGT TAGCAATTAT
GCTGATGACA AAGCGGAAAC ACTTCGTCCG TACGAGTCTA AAGTTTATCA GTTTGAAAAA
TAG
|
|---|
| Protein sequence | MTEDIKWWQK AVAYQVYPRS FQDANGDGIG DLQGIEQRLD YIKKLGADVI WLNPIYASPD
KDNGYDISDY EDINAKFGTM QDFDRLLQKA HDKGIKILMD LVVNHTSDQH QWFIESRSSK
DNDKRDFYIW RDPVDGHEPN NWGSFFSGPA WKFDEETGQY YLHLFVEGQP DLNWVNPEVR
QAVFDMMNFW VDKGIDGFRM DVISLISKPD GLPDGEVPEG GEYGNSDKAV ANGPHVHEYL
QEMREKVLKR ADMMTVGEAS GVDINNAIKY ANTNESELNM VFQFEHMGLD NNPNPALGKW
YDQKVSLVDL KENLSKWQND LAGKAWNSLY WDNHDQPRAV SRYGDDRAAY RVVSAKMVAT
LLHFMQGTPY VYQGEEIGMT NAYNLQREDF DDVEIKNAFK YLIDKDHLID EDTMLKYVHA
KGRDNARTPM QWDSTANAGF TTGTPWLKLN DNYDTINVEQ ALADKSSIFY YYQKLIQLRH
DLPIITTGKY QLLDPKDEQV YAYRRVGNNE QLLVINNFTD NIVTRDYSVP TNAKILVSNY
ADDKAETLRP YESKVYQFEK
|
|---|
| |