Gene LEUM_0879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLEUM_0879 
Symbol 
ID4422676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeuconostoc mesenteroides subsp. mesenteroides ATCC 8293 
KingdomBacteria 
Replicon accessionNC_008531 
Strand
Start bp872688 
End bp873209 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content36% 
IMG OID639674586 
Product2'-5' RNA ligase 
Protein accessionYP_818360 
Protein GI116617989 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1514] 2'-5' RNA ligase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.447955 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTACGTT CTATTTTAAT ATTTCCTAAA CTTTCAGAAA TAACAACAAT CCAAAATATT 
AGGCGCGAAC TTGATCCCTT ATATCCACAT ATTCGTCCAC ACATAACTCT TGTGTTTCCA
TTTGAAAGTG AGGCTACAGA CGAAGTCATT ATCCAAAATA TTCAAACGAT TTTAAAACCA
TTCTCGGCTT TCAACGTGAC CTTTGAAAAT TTTTCGTCTG ATGAGAAAAG TTATCTTTGG
CTACCTGTTG ACGAGGGGTG TTCGGTCATT CAAAAGATGC ATGATGTTTT ATATCAATCC
CCTTTGTTCT CACCCTTTCT ACGCCCTGAA TTTCCATATA CACCCCATAT CACAGTGGGA
CAGATACACA ATCAGCAAGC AATGTTATCA ACCTTAAAAG TACTAAACTC AAAACAACTG
CAAATCCATG CTGAAATCGA TACCGTTTCA ATCGAACATA TCCTAGATAA TGACGATTCA
GACGAATTTT TCCAAATTAC CCTATTTAGA CCAAAAAAAT AA
 
Protein sequence
MLRSILIFPK LSEITTIQNI RRELDPLYPH IRPHITLVFP FESEATDEVI IQNIQTILKP 
FSAFNVTFEN FSSDEKSYLW LPVDEGCSVI QKMHDVLYQS PLFSPFLRPE FPYTPHITVG
QIHNQQAMLS TLKVLNSKQL QIHAEIDTVS IEHILDNDDS DEFFQITLFR PKK