| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LEUM_0742 |
|---|
| Symbol | |
|---|
| ID | 4422575 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008531 |
|---|
| Strand | + |
|---|
| Start bp | 719199 |
|---|
| End bp | 720872 |
|---|
| Gene Length | 1674 bp |
|---|
| Protein Length | 557 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 639674450 |
|---|
| Product | glycerophosphoryl diester phosphodiesterase |
|---|
| Protein accession | YP_818225 |
|---|
| Protein GI | 116617854 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAA TAAAATTAAA TACACTTTTT AAATGGGCAG TCGCCTTGTT TATTTACAAT
CTCGTTGCCA AAATAATCAT TTATTTTGCT CAAAAAACGT TACCGGACTT TTATCGAGTT
GATACGAGTA GTTTAGCTTC ACTGACCGAC TCAACTTCAA AATACTTAGG ATCTTTATTG
GGAATAATTG CGGTTTATAT TGTCCTTTGG TTTATGTTCG CAGGTATTGT ATTATACTTT
CTTCGGCGTT CGTGGGGAGA AAAAAGCGAA AAGCGTTTTA CTAGGCAGTT GTTGTCTTAC
AAATTACATA CTTCAATCGC GGCATTTATT ATTTTGATGG TCCCGTTAGT TGAATTTGGT
TTAAAAGTGC CATTTGCTCA ATATCTTGCA TTACCCAAAA CTTTTGTTGA TATGGTGAGT
GGATTTTGGG CAAATACAAT TTTCACAGCG TGTTATCTTG TACTGATTTT ATTGTTAATT
AAATTCAGAC ACATTAGTTA TTTTGCGATT TATCAAGATT ATTCCTTATT GAACGCTATC
AAGATATCTG CAAGAGAAGG CATGGCCTCG GGAATACAGT TATTCTTAAA ATCAATAATT
CGTTTGGTGG TAGCAAGTGG CATTGGTTTT GCGTTATTAT ATTTTTTGCA GCTATTTGCT
GATACTTTTT TTGACGTAAA TAATAGACGC CTCATTGCTA ATATCTTACT TGCCATTACA
AGTGGATTAA TGTATGTTAT TACTGCATAT ATCTTAAACC TGTATGTCAC TCTTTTGACA
ACCGACCACA AGAAAGATGC TGAAAAAAAA TTGAATGGCT CTTCGGTATT TTTGCAAGGA
CTCATACTCA TAGTCATTGG GGCAGGCAGT ACTTTAATTT CCGGTAATTA TTTTATATCG
CCAAGAGAAA AATATTTAGT GATTGCACAT AAAGGTGTTT CATATCCGAA TGCCGTCCCA
AACTCGTTAA TTGCTTTGAA AAGAACTATT GCTACTCATC CTGATTACAT TGAAATTGAC
ATTCAACCCA CAAAAGATGG CGTATATGTT CTGACACACA ATACTAAAGT AAAAACAGTC
TCGGGGGAAA CGCTTGACAT ATCAAAAACA AATTGGTCTA CTCTGAAAAC CAAAAAAGTT
ACAGAAGATG GGCATCAATT TTATTTAACT AGCTTTTCGA AATATATTGA TTTGGCGAAT
AACAAAAAAC AAAAATTATT AGTAGAATTG AAGTTGAATC AAACTATAAC AGATGAGCAA
TTAAAACAAT TTGTAGCCAA ATATGGCAAG CAAATGAAGG AAAATAAAAG CGAAATTCAA
TCAATGAACC AAAACGTTAT TAAACGAATA TATCAATACA CTAGTTTAAC TACAGGATTA
TTATCACCCG TTAAAAATAC AGTTGATGGA AATAAAATTA GTAAATTCTA TGCTATGGAA
TATTCAAAGG TTGATGCACA TTTATCCAGC CAAATTAGAC AGTATAACAA AGATTTGTAT
AGTTGGACAG TTAACGACAA GCTTGATGTT GAAACGGCCT ATATGATAGG TGTCAATGGC
GTGATTACCG ATAAGCCACG AGAGACACGG ACGATTTTAG AAAATATCAG TGAAAAGTTG
ACTTATCGTA GAGCATTTAT TTCTATGATT TTGAATCAGC AAAGTGATAT TTAA
|
|---|
| Protein sequence | MKKIKLNTLF KWAVALFIYN LVAKIIIYFA QKTLPDFYRV DTSSLASLTD STSKYLGSLL
GIIAVYIVLW FMFAGIVLYF LRRSWGEKSE KRFTRQLLSY KLHTSIAAFI ILMVPLVEFG
LKVPFAQYLA LPKTFVDMVS GFWANTIFTA CYLVLILLLI KFRHISYFAI YQDYSLLNAI
KISAREGMAS GIQLFLKSII RLVVASGIGF ALLYFLQLFA DTFFDVNNRR LIANILLAIT
SGLMYVITAY ILNLYVTLLT TDHKKDAEKK LNGSSVFLQG LILIVIGAGS TLISGNYFIS
PREKYLVIAH KGVSYPNAVP NSLIALKRTI ATHPDYIEID IQPTKDGVYV LTHNTKVKTV
SGETLDISKT NWSTLKTKKV TEDGHQFYLT SFSKYIDLAN NKKQKLLVEL KLNQTITDEQ
LKQFVAKYGK QMKENKSEIQ SMNQNVIKRI YQYTSLTTGL LSPVKNTVDG NKISKFYAME
YSKVDAHLSS QIRQYNKDLY SWTVNDKLDV ETAYMIGVNG VITDKPRETR TILENISEKL
TYRRAFISMI LNQQSDI
|
|---|
| |