Gene LEUM_0578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLEUM_0578 
Symbol 
ID4422429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeuconostoc mesenteroides subsp. mesenteroides ATCC 8293 
KingdomBacteria 
Replicon accessionNC_008531 
Strand
Start bp548516 
End bp549370 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content35% 
IMG OID639674288 
Productamino acid ABC transporter periplasmic protein 
Protein accessionYP_818065 
Protein GI116617694 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAGCA TGAAAAAGAA GATTGTTGTT AATAGTATTG TTGGTATTTT ATTTATCGCA 
CTGGTCGTTA TGGCAGCTCT CTCTTTATCT AATAATTCCC AAAAAAGCAA AAGTACAGAA
CAGACAGTAG TGAAAACAGA TCAATGGTCA CGAATCAAGA GGGAAAAGCA AATTACGATT
GGTCTAGATG ATACATTTGT TCCAATGGGA TTTCGCGATA AATCGGGTAA ATTAGTAGGA
TTTGATGTTG ATTTGGCAAC CGCTGTGTTC AAGAGTTTGG GTATCAAGGT AAAGTGGCAA
CCCATTGATT GGTCAATGAA AGAAACAGAA TTAAATACCG GAAACATTGA TGCTATCTGG
AACGGTTATA CAATTACAGA TGACCGGAAA AAGAAGGTTG CTTTTTCAAC ACCTTATCAC
AAGGCAACGC AAGTGCTTGT TACTTTAAAG AAAAGTAACA TTAATAAGTT TTCTGATATG
CAAGATAAAG TATTGGGCGA TCAAACAGCT TCAAGTGGTG ATCAAACTTT TGCACAGTAT
CCTAAAGTTT TGAAACAATA TGTTAAAGAT CAAAAGGTTA TTGGCTATGA TACATTTGAC
AAAGCATTCA ATGATTTGAA TGCGAGTCGC ATTGATGGGT TATTGATTGA TGAAGACTAT
GCACGTTATT ATGTTGCGCA TCAGTCTAAC CCAAATGATT ACACAATCAC AACAGGTGGT
TTCCCAGTAA ATGACAATGC AGTTGGCTTC CGCAAAGCAG ATAAAAAATT ACGACAAGCA
GTAAATAAAG AATTAAAAAC TTATAAAAAA GACGGTCGTT TACAAAAATA TAGTACGAAA
TGGTTTGGTA ATTGA
 
Protein sequence
MPSMKKKIVV NSIVGILFIA LVVMAALSLS NNSQKSKSTE QTVVKTDQWS RIKREKQITI 
GLDDTFVPMG FRDKSGKLVG FDVDLATAVF KSLGIKVKWQ PIDWSMKETE LNTGNIDAIW
NGYTITDDRK KKVAFSTPYH KATQVLVTLK KSNINKFSDM QDKVLGDQTA SSGDQTFAQY
PKVLKQYVKD QKVIGYDTFD KAFNDLNASR IDGLLIDEDY ARYYVAHQSN PNDYTITTGG
FPVNDNAVGF RKADKKLRQA VNKELKTYKK DGRLQKYSTK WFGN