| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LEUM_0546 |
|---|
| Symbol | |
|---|
| ID | 4422397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008531 |
|---|
| Strand | + |
|---|
| Start bp | 510817 |
|---|
| End bp | 512163 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 639674256 |
|---|
| Product | major facilitator superfamily permease |
|---|
| Protein accession | YP_818033 |
|---|
| Protein GI | 116617662 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000674821 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAAAA ACATCAGAAA ATTAACACCA TTTTCACTTG CGTTATTATC GATTGCATTT
ATCATGTCGA TTAGTCAGTC TACTATGACA ACGGCTTATC CGATTTTGAT GAAAAGTTTT
AATGTTAATG CGAGCACTGT TCAGTGGTTA ACAACAGGTT TTATGGTTGC AATGACACTA
GTCATGCCGC TAAGTCCTTG GCTTTTGGAT AATGTGTCCT TACGTAAATT ACTCAATGGA
ATTGTAGCCC TCTTTTTACT AGGAACGTTT TTGGCTATGG TTACACCCAA CTTTACCGGT
ATTATTATCG GTCGGTTGTT AGAAGGTTTA GCGGTGGGGG CCTTATTTCC AACATTTCAA
AGTGTCATCA TGGAAAATAC TGATAAAAAT CAACGAGGTC TAGCTATGGG CGTAGTTGGT
TTAGTTATGG GTTCAGCCTT AGCTGTTGGT CCGATTATTT CTGGCGTGGT CCTGCAATGG
ATTTCTTGGC GTGCTTTATT TATGTTATTT TTTGTCATAT TGCTGATTTT GATTATTGTT
TTGCAAAATA AAATAGAAAA CACGCACACT ATGAAACCAT CTGAATTCGA TTGGTTTTCG
GCTATAACCT TACTCGGATT TGGCGGCATT TTGTATGACA TTTCAATCAT TCCAACATCA
GGAATTAACT TCTCGTGGTG GTTGATTTTA ATAATTAGTG TCAGTTTATT AGCCATATTT
ATCGTTCGTC AAGTAAAATT ACCTCAACCG TTTTTAGATT TAGCGGTGCT CAAATATAGA
GGCTATGTTC CAGCTATGTT TTTAACGGGA TTATCATATT CAGGACTAAT TATTGCAACG
GTTCTGATGC CTTTGTTTTA TCAAAAAGTT TTTCATTTTA GCCCATTGTG GTCAGGACTA
CTCATGGTAC CTGCAGCAAT CTTTCTCAGC CAATTGAATC CAAGATCAGG GGCGATGCTC
AACAGAATTG GGTTAAAAAA ATTAGTTTAT ATTGGTATGG CAATGATGCT TGTAGGGTAT
GCGATTTTGG GTACTTTAGG GTCATTTTCG TGGATAGCGT GTTTGATAGC AGCTATGTTA
CTTGAAGGTG GCAATGCTTT CATTATGATG CCCGCAATTA CTGCGGCAAA TAACGCACTA
CCTAAAAATT TAGTTAGTCA TGGTACTGCG ATTATTACTA CGATGCGTCA AGTCATTGGT
GCAGGAAGTG TGGTTGTTGC TTCTATTTTA ATCACCGCAA TTAATACCAA TTCATCATTT
GTACATGCGT TGTTAATGAC AAGTCGCTGG TTTATTGTTG TGCCACTCAT TGGATTACTA
CTGACAGTCA GAATCAAGTC GAATTAA
|
|---|
| Protein sequence | MFKNIRKLTP FSLALLSIAF IMSISQSTMT TAYPILMKSF NVNASTVQWL TTGFMVAMTL
VMPLSPWLLD NVSLRKLLNG IVALFLLGTF LAMVTPNFTG IIIGRLLEGL AVGALFPTFQ
SVIMENTDKN QRGLAMGVVG LVMGSALAVG PIISGVVLQW ISWRALFMLF FVILLILIIV
LQNKIENTHT MKPSEFDWFS AITLLGFGGI LYDISIIPTS GINFSWWLIL IISVSLLAIF
IVRQVKLPQP FLDLAVLKYR GYVPAMFLTG LSYSGLIIAT VLMPLFYQKV FHFSPLWSGL
LMVPAAIFLS QLNPRSGAML NRIGLKKLVY IGMAMMLVGY AILGTLGSFS WIACLIAAML
LEGGNAFIMM PAITAANNAL PKNLVSHGTA IITTMRQVIG AGSVVVASIL ITAINTNSSF
VHALLMTSRW FIVVPLIGLL LTVRIKSN
|
|---|
| |