| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LEUM_0518 |
|---|
| Symbol | |
|---|
| ID | 4423797 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008531 |
|---|
| Strand | + |
|---|
| Start bp | 480128 |
|---|
| End bp | 481105 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639674228 |
|---|
| Product | biotin operon repressor |
|---|
| Protein accession | YP_818006 |
|---|
| Protein GI | 116617635 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0340] Biotin-(acetyl-CoA carboxylase) ligase |
|---|
| TIGRFAM ID | [TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region
[TIGR00122] BirA biotin operon repressor domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0966787 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAA CTGATCAGCT TTTAAAATAC TTTCTGAAAC ACGAAGGTGA ATATTTAAGT
GGCGAGACGT TAGCTAATCG ATTAGGTGTG AGCCGCGCGG CTATTTGGAA AGCAGTTCAG
AAACTAAATG AAGACGGCCA TCAAATCGAT AGTCAACATA GAAAAGGCTA TCGCTACAAA
GAAACAGGCG TTTTGAGCGT ACCAGCTATT AAGGCGCTGA TTGCCACTAA TTGGGACATT
CAGGTATTTG ATCAATTAGA TTCATCAAAT TCATATGCTA AGGAAGCCCT AGCGGCTGGG
AAGATAGTTC ACCCAACTGT TATCATTGCC GATCAACAAA ATGCCGCATA CGGCCGCTTT
AGACGCTCTT TCGTTGCACC GGAAAAAACA GGGTTGTATT TATCCATTGC GTTACCGGTG
ATGAATGATA GGGTGTTAGA GCCAGGACTA CTGACCACCG CTACAGCAGT AATTGTTCGA
CACGTTATTG CATCATCCTT AGGATATCAA CTCTCCTTTA AATGGGTTAA TGACTTAATC
TTTAATGATA AGAAAGTTGG CGGTATTTTA ACAGAAGGTG TCCTCGATAT AGAGTCGCAA
AGTTTGACAT CTTTGGTTGT CGGAATCGGT TTAAATTTAA TTCAACCCAT AAATTTACCT
GATCAGTTGG ATAAAAAAGT TGGTGGCATC GTTTCGGATT TAGTTTTTTC ACGAAACATG
ATGATTGCAA AGTTGGTTGA TGAATTTGCT GACATGATTA ATCAATATCA GACAGGAAAG
TATTTGCCTG AATATAGGGC GCACAATATT GTCTTGGGAC ACGAAGTTGT AGTTCAATAT
GCTGGTCAAA AAATTCATGG AAAAGCGGTT GAAATAAGCA ATCAAGGTGC ATTAATTTTA
GTGACATTCG CTGGCGAAAA AATCACAATA TCCTCAGGCG AAATTACCAA ACTTAATGTT
AATGGTAAGG AATATTGA
|
|---|
| Protein sequence | MKTTDQLLKY FLKHEGEYLS GETLANRLGV SRAAIWKAVQ KLNEDGHQID SQHRKGYRYK
ETGVLSVPAI KALIATNWDI QVFDQLDSSN SYAKEALAAG KIVHPTVIIA DQQNAAYGRF
RRSFVAPEKT GLYLSIALPV MNDRVLEPGL LTTATAVIVR HVIASSLGYQ LSFKWVNDLI
FNDKKVGGIL TEGVLDIESQ SLTSLVVGIG LNLIQPINLP DQLDKKVGGI VSDLVFSRNM
MIAKLVDEFA DMINQYQTGK YLPEYRAHNI VLGHEVVVQY AGQKIHGKAV EISNQGALIL
VTFAGEKITI SSGEITKLNV NGKEY
|
|---|
| |